Information for 10-GAGAGATCAVAAC (Motif 19)

A C T G G T C A A T C G C T G A A C T G C G T A A C G T A G T C C G T A T A G C C G T A G T C A A G T C
Reverse Opposite:
C T A G A C G T C G A T A C T G A C G T A C T G C G T A A C G T A G T C A G C T A T G C A C G T A G T C
p-value:1e-8
log p-value:-1.881e+01
Information Content per bp:1.848
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.7 +/- 26.2bp
Average Position of motif in Background34.3 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0040.1_Lef1_1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GAGAGATCAVAAC----
NANAGATCAAAGGGNNN
 A C T G G T C A A T C G C T G A A C T G C G T A A C G T A G T C C G T A T A G C C G T A G T C A A G T C A C G T A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

GATA2/MA0036.2/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GAGAGATCAVAAC--
-NCAGATAAGAANNN
 A C T G G T C A A T C G C T G A A C T G C G T A A C G T A G T C C G T A T A G C C G T A G T C A A G T C A C G T A C G T
A C G T C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T

Tcf7/MA0769.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GAGAGATCAVAAC
-AAAGATCAAAGG
 A C T G G T C A A T C G C T G A A C T G C G T A A C G T A G T C C G T A T A G C C G T A G T C A A G T C
A C G T C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GAGAGATCAVAAC----
NNNAGATCAAAGGANNN
 A C T G G T C A A T C G C T G A A C T G C G T A A C G T A G T C C G T A T A G C C G T A G T C A A G T C A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

LEF1/MA0768.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GAGAGATCAVAAC---
-AAAGATCAAAGGGTT
 A C T G G T C A A T C G C T G A A C T G C G T A A C G T A G T C C G T A T A G C C G T A G T C A A G T C A C G T A C G T A C G T
A C G T T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

Gata1/MA0035.3/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GAGAGATCAVAAC
-ANAGATAAGAA-
 A C T G G T C A A T C G C T G A A C T G C G T A A C G T A G T C C G T A T A G C C G T A G T C A A G T C
A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GAGAGATCAVAAC
--NGGATTAN---
 A C T G G T C A A T C G C T G A A C T G C G T A A C G T A G T C C G T A T A G C C G T A G T C A A G T C
A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GAGAGATCAVAAC-----
---ATGTCACAACAACAC
 A C T G G T C A A T C G C T G A A C T G C G T A A C G T A G T C C G T A T A G C C G T A G T C A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

Gata4/MA0482.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GAGAGATCAVAAC
NNGAGATAAGA--
 A C T G G T C A A T C G C T G A A C T G C G T A A C G T A G T C C G T A T A G C C G T A G T C A A G T C
T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GAGAGATCAVAAC
---AGATAASR--
 A C T G G T C A A T C G C T G A A C T G C G T A A C G T A G T C C G T A T A G C C G T A G T C A A G T C
A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T A C G T