Information for 1-GAGCASMRGTTACAGG (Motif 6)

A C T G C T G A C T A G G A T C C T G A A T C G G T C A C T G A A C T G C G A T A C G T T C G A A T G C C G T A A C T G A C T G
Reverse Opposite:
A G T C G T A C A C G T A T C G A C G T C G T A G C T A A G T C A G C T A C G T A T G C A G C T C T A G A G T C A G C T A G T C
p-value:1e-10
log p-value:-2.467e+01
Information Content per bp:1.772
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.4 +/- 23.9bp
Average Position of motif in Background83.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:1
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GAGCASMRGTTACAGG--
---AAGGKGRCGCAGGCA
 A C T G C T G A C T A G G A T C C T G A A T C G G T C A C T G A A C T G C G A T A C G T T C G A A T G C C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GAGCASMRGTTACAGG
GGGAGGACNG--------
 A C G T A C G T A C T G C T G A C T A G G A T C C T G A A T C G G T C A C T G A A C T G C G A T A C G T T C G A A T G C C G T A A C T G A C T G
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:3
Score:0.50
Offset:7
Orientation:forward strand
Alignment:GAGCASMRGTTACAGG---
-------AGGTCAAGGTCA
 A C T G C T G A C T A G G A T C C T G A A T C G G T C A C T G A A C T G C G A T A C G T T C G A A T G C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

ZNF263/MA0528.1/Jaspar

Match Rank:4
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GAGCASMRGTTACAGG----
GGAGGAGGAGGGGGAGGAGGA
 A C G T A C T G C T G A C T A G G A T C C T G A A T C G G T C A C T G A A C T G C G A T A C G T T C G A A T G C C G T A A C T G A C T G A C G T A C G T A C G T A C G T
C T A G C T A G C T G A C A T G T A C G G C T A C A T G T C A G T C G A T C A G C T A G C T A G C T A G T C A G C T G A C T A G C T A G C T G A C T A G C T A G C T G A

Ascl2/MA0816.1/Jaspar

Match Rank:5
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:GAGCASMRGTTACAGG
-AGCAGCTGCT-----
 A C T G C T G A C T A G G A T C C T G A A T C G G T C A C T G A A C T G C G A T A C G T T C G A A T G C C G T A A C T G A C T G
A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:6
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---GAGCASMRGTTACAGG
NNNNAGCAGCTGCTGAN--
 A C G T A C G T A C G T A C T G C T G A C T A G G A T C C T G A A T C G G T C A C T G A A C T G C G A T A C G T T C G A A T G C C G T A A C T G A C T G
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G A C G T A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:7
Score:0.48
Offset:5
Orientation:reverse strand
Alignment:GAGCASMRGTTACAGG
-----NTTGATACATT
 A C T G C T G A C T A G G A T C C T G A A T C G G T C A C T G A A C T G C G A T A C G T T C G A A T G C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:8
Score:0.48
Offset:7
Orientation:forward strand
Alignment:GAGCASMRGTTACAGG---
-------AGGTCAAGGTCA
 A C T G C T G A C T A G G A T C C T G A A T C G G T C A C T G A A C T G C G A T A C G T T C G A A T G C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

PB0099.1_Zfp691_1/Jaspar

Match Rank:9
Score:0.47
Offset:-5
Orientation:reverse strand
Alignment:-----GAGCASMRGTTACAGG
NNNNTGAGCACTGTNNG----
 A C G T A C G T A C G T A C G T A C G T A C T G C T G A C T A G G A T C C T G A A T C G G T C A C T G A A C T G C G A T A C G T T C G A A T G C C G T A A C T G A C T G
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G A C G T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.47
Offset:11
Orientation:forward strand
Alignment:GAGCASMRGTTACAGG-----
-----------VCAGGTRDRY
 A C T G C T G A C T A G G A T C C T G A A T C G G T C A C T G A A C T G C G A T A C G T T C G A A T G C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C