Information for 2-CTTCYCCTCAATG (Motif 2)

A G T C A G C T A C G T A T G C A G T C A G T C A G T C C G A T A G T C C G T A C G T A A G C T A C T G
Reverse Opposite:
G T A C C T G A C G A T C G A T A C T G C G T A A C T G A C T G C T A G A T C G C G T A C T G A C T A G
p-value:1e-12
log p-value:-2.805e+01
Information Content per bp:1.833
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.97%
Number of Background Sequences with motif20.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets67.1 +/- 16.6bp
Average Position of motif in Background42.5 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0128.1_Gcm1_2/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTTCYCCTCAATG----
NTCNTCCCCTATNNGNN
 A G T C A G C T A C G T A T G C A G T C A G T C A G T C C G A T A G T C C G T A C G T A A G C T A C T G A C G T A C G T A C G T A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CTTCYCCTCAATG
KGCCCTTCCCCA-----
 A C G T A C G T A C G T A C G T A G T C A G C T A C G T A T G C A G T C A G T C A G T C C G A T A G T C C G T A C G T A A G C T A C T G
C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A A C G T A C G T A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CTTCYCCTCAATG
--TCCCCA-----
 A G T C A G C T A C G T A T G C A G T C A G T C A G T C C G A T A G T C C G T A C G T A A G C T A C T G
A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:4
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CTTCYCCTCAATG
TCACCCCGCCCCAAATT-
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T A C G T A T G C A G T C A G T C A G T C C G A T A G T C C G T A C G T A A G C T A C T G
A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTTCYCCTCAATG-----
--TACCCACAATGCATTG
 A G T C A G C T A C G T A T G C A G T C A G T C A G T C C G A T A G T C C G T A C G T A A G C T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G

PB0058.1_Sfpi1_1/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CTTCYCCTCAATG
NNACTTCCTCTTNN--
 A C G T A C G T A C G T A G T C A G C T A C G T A T G C A G T C A G T C A G T C C G A T A G T C C G T A C G T A A G C T A C T G
C A G T G C T A C T G A A T G C C G A T C G A T A G T C A G T C A C G T A G T C G C A T G C A T G C T A T C G A A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CTTCYCCTCAATG
--TGACCTYA---
 A G T C A G C T A C G T A T G C A G T C A G T C A G T C C G A T A G T C C G T A C G T A A G C T A C T G
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CTTCYCCTCAATG
ATCCCCGCCCCTAAAA-
 A C G T A C G T A C G T A C G T A G T C A G C T A C G T A T G C A G T C A G T C A G T C C G A T A G T C C G T A C G T A A G C T A C T G
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTTCYCCTCAATG
TTCCCCCTAC---
 A G T C A G C T A C G T A T G C A G T C A G T C A G T C C G A T A G T C C G T A C G T A A G C T A C T G
A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CTTCYCCTCAATG
GCTTCC--------
 A C G T A G T C A G C T A C G T A T G C A G T C A G T C A G T C C G A T A G T C C G T A C G T A A G C T A C T G
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T