Information for 5-AGCTCWGTGGACASWG (Motif 7)

C G T A A C T G T A G C C A G T G T A C C G T A A T C G G A C T A C T G A T C G C G T A G T A C T G C A A T C G G C T A C T A G
Reverse Opposite:
G A T C C G A T A T C G A C G T A C T G A C G T A T G C A G T C C T G A T A G C G C A T A C T G G C T A A T C G A G T C C G A T
p-value:1e-11
log p-value:-2.647e+01
Information Content per bp:1.702
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.67%
Number of Background Sequences with motif27.8
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets69.3 +/- 15.0bp
Average Position of motif in Background48.0 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGCTCWGTGGACASWG--
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A C G T C G T A A C T G T A G C C A G T G T A C C G T A A T C G G A C T A C T G A T C G C G T A G T A C T G C A A T C G G C T A C T A G A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGCTCWGTGGACASWG--
TCAGCACCATGGACAGCTCC
 A C G T A C G T C G T A A C T G T A G C C A G T G T A C C G T A A T C G G A C T A C T G A T C G C G T A G T A C T G C A A T C G G C T A C T A G A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

ZNF354C/MA0130.1/Jaspar

Match Rank:3
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:AGCTCWGTGGACASWG
------GTGGAT----
 C G T A A C T G T A G C C A G T G T A C C G T A A T C G G A C T A C T G A T C G C G T A G T A C T G C A A T C G G C T A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:4
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:AGCTCWGTGGACASWG
-----AATGGAAAAT-
 C G T A A C T G T A G C C A G T G T A C C G T A A T C G G A C T A C T G A T C G C G T A G T A C T G C A A T C G G C T A C T A G
A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AGCTCWGTGGACASWG---
---NNATTGGACTTTNGNN
 C G T A A C T G T A G C C A G T G T A C C G T A A T C G G A C T A C T G A T C G C G T A G T A C T G C A A T C G G C T A C T A G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGCTCWGTGGACASWG
TGGACTTTGNNCTNTG
 C G T A A C T G T A G C C A G T G T A C C G T A A T C G G A C T A C T G A T C G C G T A G T A C T G C A A T C G G C T A C T A G
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

NFATC1/MA0624.1/Jaspar

Match Rank:7
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:AGCTCWGTGGACASWG
-----NNTGGAAANN-
 C G T A A C T G T A G C C A G T G T A C C G T A A T C G G A C T A C T G A T C G C G T A G T A C T G C A A T C G G C T A C T A G
A C G T A C G T A C G T A C G T A C G T C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGCTCWGTGGACASWG--
-TACATGTGCACATAAAA
 C G T A A C T G T A G C C A G T G T A C C G T A A T C G G A C T A C T G A T C G C G T A G T A C T G C A A T C G G C T A C T A G A C G T A C G T
A C G T C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

NFATC3/MA0625.1/Jaspar

Match Rank:9
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:AGCTCWGTGGACASWG
-----AATGGAAAAT-
 C G T A A C T G T A G C C A G T G T A C C G T A A T C G G A C T A C T G A T C G C G T A G T A C T G C A A T C G G C T A C T A G
A C G T A C G T A C G T A C G T A C G T C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AGCTCWGTGGACASWG
----NCGCGGACGTTG
 C G T A A C T G T A G C C A G T G T A C C G T A A T C G G A C T A C T G A T C G C G T A G T A C T G C A A T C G G C T A C T A G
A C G T A C G T A C G T A C G T T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G