Information for 11-CAACMCTCCACYSSMM (Motif 20)

A G T C C G T A C G T A A T G C G T A C A T G C A C G T A G T C A G T C C G T A A G T C A G C T A T G C A T G C G T C A G T C A
Reverse Opposite:
A C G T A C G T A T C G A T C G C T G A A C T G C G A T A C T G A C T G C G T A A T C G C A T G A T C G A C G T A C G T A C T G
p-value:1e-9
log p-value:-2.078e+01
Information Content per bp:1.844
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.0 +/- 19.2bp
Average Position of motif in Background77.6 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.64
Offset:5
Orientation:forward strand
Alignment:CAACMCTCCACYSSMM
-----ATCCAC-----
 A G T C C G T A C G T A A T G C G T A C A T G C A C G T A G T C A G T C C G T A A G T C A G C T A T G C A T G C G T C A G T C A
A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:2
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CAACMCTCCACYSSMM
-NSCACTYVAV-----
 A G T C C G T A C G T A A T G C G T A C A T G C A C G T A G T C A G T C C G T A A G T C A G C T A T G C A T G C G T C A G T C A
A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CAACMCTCCACYSSMM
-RSCACTYRAG-----
 A G T C C G T A C G T A A T G C G T A C A T G C A C G T A G T C A G T C C G T A A G T C A G C T A T G C A T G C G T C A G T C A
A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CAACMCTCCACYSSMM
-ATCACCCCAT-----
 A G T C C G T A C G T A A T G C G T A C A T G C A C G T A G T C A G T C C G T A A G T C A G C T A T G C A T G C G T C A G T C A
A C G T T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:5
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CAACMCTCCACYSSMM
TACGCCCCGCCACTCTG-
 A C G T A C G T A G T C C G T A C G T A A T G C G T A C A T G C A C G T A G T C A G T C C G T A A G T C A G C T A T G C A T G C G T C A G T C A
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CAACMCTCCACYSSMM
AASCACTCAA------
 A G T C C G T A C G T A A T G C G T A C A T G C A C G T A G T C A G T C C G T A A G T C A G C T A T G C A T G C G T C A G T C A
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

RREB1/MA0073.1/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CAACMCTCCACYSSMM-
CCCCAAACCACCCCCCCCCA
 A C G T A C G T A C G T A G T C C G T A C G T A A T G C G T A C A T G C A C G T A G T C A G T C C G T A A G T C A G C T A T G C A T G C G T C A G T C A A C G T
G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C

KLF16/MA0741.1/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CAACMCTCCACYSSMM
-GCCACGCCCCC----
 A G T C C G T A C G T A A T G C G T A C A T G C A C G T A G T C A G T C C G T A A G T C A G C T A T G C A T G C G T C A G T C A
A C G T T C A G G T A C G T A C T G C A G T A C C T A G G T A C T A G C G A T C G T A C G A T C A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CAACMCTCCACYSSMM
MRSCACTYAA------
 A G T C C G T A C G T A A T G C G T A C A T G C A C G T A G T C A G T C C G T A A G T C A G C T A T G C A T G C G T C A G T C A
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

ZNF740/MA0753.1/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CAACMCTCCACYSSMM
-CCCCCCCCAC-----
 A G T C C G T A C G T A A T G C G T A C A T G C A C G T A G T C A G T C C G T A A G T C A G C T A T G C A T G C G T C A G T C A
A C G T T G A C G T A C G T A C G A T C G A T C A G T C T G A C G T A C G T C A G A T C A C G T A C G T A C G T A C G T A C G T