Information for 2-TCTACGCGAG (Motif 6)

A C G T A G T C A C G T C G T A A T G C A C T G A G T C A C T G C T G A A C T G
Reverse Opposite:
G T A C A G C T A G T C C T A G G T A C A T C G A C G T C G T A A C T G C G T A
p-value:1e-11
log p-value:-2.636e+01
Information Content per bp:1.879
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.4 +/- 22.9bp
Average Position of motif in Background53.3 +/- 0.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:1
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCTACGCGAG
GGGTACGTGC-
 A C G T A C G T A G T C A C G T C G T A A T G C A C T G A G T C A C T G C T G A A C T G
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:2
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TCTACGCGAG
--TACGTGCV
 A C G T A G T C A C G T C G T A A T G C A C T G A G T C A C T G C T G A A C T G
A C G T A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C

PH0048.1_Hoxa13/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TCTACGCGAG--
ANATTTTACGAGNNNN
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A T G C A C T G A G T C A C T G C T G A A C T G A C G T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

HOXC13/MA0907.1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TCTACGCGAG
NTTTTACGAGN-
 A C G T A C G T A C G T A G T C A C G T C G T A A T G C A C T G A G T C A C T G C T G A A C T G
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TCTACGCGAG
TGTCTAGACG--
 A C G T A C G T A C G T A G T C A C G T C G T A A T G C A C T G A G T C A C T G C T G A A C T G
C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G A C G T A C G T

PB0161.1_Rxra_2/Jaspar

Match Rank:6
Score:0.54
Offset:-7
Orientation:reverse strand
Alignment:-------TCTACGCGAG
NNNNCAACCTTCGNGA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A T G C A C T G A G T C A C T G C T G A A C T G
G T C A C A T G G C A T C T G A A G T C T C G A T G C A T G A C G A T C C G A T C G A T A G T C C A T G A G T C A C T G G T C A A C G T

Tcfl5/MA0632.1/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TCTACGCGAG--
--GGCACGTGCC
 A C G T A G T C A C G T C G T A A T G C A C T G A G T C A C T G C T G A A C T G A C G T A C G T
A C G T A C G T C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C

PH0068.1_Hoxc13/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----TCTACGCGAG--
NAATTTTACGAGNTNN
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A T G C A C T G A G T C A C T G C T G A A C T G A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

PB0199.1_Zfp161_2/Jaspar

Match Rank:9
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----TCTACGCGAG
NNGCNCTGCGCGGC
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A T G C A C T G A G T C A C T G C T G A A C T G
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TCTACGCGAG
-RTACGTGC-
 A C G T A G T C A C G T C G T A A T G C A C T G A G T C A C T G C T G A A C T G
A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T