Information for 16-GCAGSTGGTCTGG (Motif 25)

A T C G T G A C G C T A A C T G T A G C C G A T T C A G C A T G C A G T T A G C A C G T C T A G A T C G
Reverse Opposite:
T A G C G A T C T C G A A T C G G T C A G T A C A G T C C G T A A T C G A G T C C G A T A C T G A T G C
p-value:1e-6
log p-value:-1.545e+01
Information Content per bp:1.677
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.69%
Number of Background Sequences with motif176.0
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets43.7 +/- 26.5bp
Average Position of motif in Background50.5 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GCAGSTGGTCTGG
SDGCAGGTGCNS---
 A C G T A C G T A T C G T G A C G C T A A C T G T A G C C G A T T C A G C A T G C A G T T A G C A C G T C T A G A T C G
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GCAGSTGGTCTGG
AGCAGCTGCT----
 A C G T A T C G T G A C G C T A A C T G T A G C C G A T T C A G C A T G C A G T T A G C A C G T C T A G A T C G
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GCAGSTGGTCTGG
GCAGCTGTNN---
 A T C G T G A C G C T A A C T G T A G C C G A T T C A G C A T G C A G T T A G C A C G T C T A G A T C G
T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:4
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----GCAGSTGGTCTGG
NNNNAGCAGCTGCTGAN-
 A C G T A C G T A C G T A C G T A C G T A T C G T G A C G C T A A C T G T A G C C G A T T C A G C A T G C A G T T A G C A C G T C T A G A T C G
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:5
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----GCAGSTGGTCTGG
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A C G T A T C G T G A C G C T A A C T G T A G C C G A T T C A G C A T G C A G T T A G C A C G T C T A G A T C G
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:6
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GCAGSTGGTCTGG
NNVVCAGCTGBN----
 A C G T A C G T A C G T A T C G T G A C G C T A A C T G T A G C C G A T T C A G C A T G C A G T T A G C A C G T C T A G A T C G
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:7
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GCAGSTGGTCTGG
NNCAGGTGTN----
 A C G T A T C G T G A C G C T A A C T G T A G C C G A T T C A G C A T G C A G T T A G C A C G T C T A G A T C G
G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GCAGSTGGTCTGG
CAGCAGCTGN-----
 A C G T A C G T A T C G T G A C G C T A A C T G T A G C C G A T T C A G C A T G C A G T T A G C A C G T C T A G A T C G
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GCAGSTGGTCTGG
ACAGCTGTTN---
 A T C G T G A C G C T A A C T G T A G C C G A T T C A G C A T G C A G T T A G C A C G T C T A G A T C G
T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:10
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCAGSTGGTCTGG
GACAGCTGCAG---
 A C G T A T C G T G A C G C T A A C T G T A G C C G A T T C A G C A T G C A G T T A G C A C G T C T A G A T C G
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T A C G T