Information for 7-CAGTGTCAAGCAKGCT (Motif 21)

A T G C C T G A A C T G A G C T A C T G A G C T A G T C G T C A C T G A A C T G A G T C C G T A A C G T T C A G A G T C C A G T
Reverse Opposite:
G C T A C T A G A G T C G T C A A C G T C T A G T G A C A G C T A C G T C T A G C T G A T G A C C T G A A G T C A G C T A T C G
p-value:1e-8
log p-value:-1.947e+01
Information Content per bp:1.736
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.3 +/- 22.0bp
Average Position of motif in Background58.2 +/- 8.2bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL002.1_INR/Jaspar

Match Rank:1
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CAGTGTCAAGCAKGCT
TCAGTCTT---------
 A C G T A T G C C T G A A C T G A G C T A C T G A G C T A G T C G T C A C T G A A C T G A G T C C G T A A C G T T C A G A G T C C A G T
C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:2
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CAGTGTCAAGCAKGCT
TNNNNGGTGTCATNTNT---
 A C G T A C G T A C G T A C G T A T G C C T G A A C T G A G C T A C T G A G C T A G T C G T C A C T G A A C T G A G T C C G T A A C G T T C A G A G T C C A G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CAGTGTCAAGCAKGCT
-SCTGTCAVTCAV---
 A T G C C T G A A C T G A G C T A C T G A G C T A G T C G T C A C T G A A C T G A G T C C G T A A C G T T C A G A G T C C A G T
A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CAGTGTCAAGCAKGCT
-NCTGTCAATCAN---
 A T G C C T G A A C T G A G C T A C T G A G C T A G T C G T C A C T G A A C T G A G T C C G T A A C G T T C A G A G T C C A G T
A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CAGTGTCAAGCAKGCT
CACAGN------------
 A C G T A C G T A T G C C T G A A C T G A G C T A C T G A G C T A G T C G T C A C T G A A C T G A G T C C G T A A C G T T C A G A G T C C A G T
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:6
Score:0.49
Offset:-7
Orientation:reverse strand
Alignment:-------CAGTGTCAAGCAKGCT
NNNNTGCCAGTGATTG-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A A C T G A G C T A C T G A G C T A G T C G T C A C T G A A C T G A G T C C G T A A C G T T C A G A G T C C A G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:7
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:CAGTGTCAAGCAKGCT
--NTGTCAN-------
 A T G C C T G A A C T G A G C T A C T G A G C T A G T C G T C A C T G A A C T G A G T C C G T A A C G T T C A G A G T C C A G T
A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:8
Score:0.49
Offset:0
Orientation:forward strand
Alignment:CAGTGTCAAGCAKGCT
GAAGATCAATCACTTA
 A T G C C T G A A C T G A G C T A C T G A G C T A G T C G T C A C T G A A C T G A G T C C G T A A C G T T C A G A G T C C A G T
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:CAGTGTCAAGCAKGCT
TGGTTTCAGT------
 A T G C C T G A A C T G A G C T A C T G A G C T A G T C G T C A C T G A A C T G A G T C C G T A A C G T T C A G A G T C C A G T
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:10
Score:0.48
Offset:5
Orientation:forward strand
Alignment:CAGTGTCAAGCAKGCT
-----CCAATCAA---
 A T G C C T G A A C T G A G C T A C T G A G C T A G T C G T C A C T G A A C T G A G T C C G T A A C G T T C A G A G T C C A G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T