Information for 13-ACAARTAAACTGM (Motif 19)

C G T A G T A C C G T A C G T A C T G A A G C T C G T A C T G A C T G A T A G C A C G T A C T G G T A C
Reverse Opposite:
C A T G A G T C C G T A A T C G A G C T A G C T C G A T C T G A G A C T A C G T A C G T A C T G A C G T
p-value:1e-8
log p-value:-2.044e+01
Information Content per bp:1.749
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.2 +/- 6.0bp
Average Position of motif in Background58.1 +/- 4.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0070.1_Sox30_1/Jaspar

Match Rank:1
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----ACAARTAAACTGM
AATGAACAATGGAATT--
 A C G T A C G T A C G T A C G T A C G T C G T A G T A C C G T A C G T A C T G A A G C T C G T A C T G A C T G A T A G C A C G T A C T G G T A C
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ACAARTAAACTGM
GGAAANTGAAACTNA
 A C G T A C G T C G T A G T A C C G T A C G T A C T G A A G C T C G T A C T G A C T G A T A G C A C G T A C T G G T A C
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

MF0011.1_HMG_class/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ACAARTAAACTGM
AACAAT--------
 A C G T C G T A G T A C C G T A C G T A C T G A A G C T C G T A C T G A C T G A T A G C A C G T A C T G G T A C
T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox1/MA0870.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ACAARTAAACTGM-
AACAATAACATTGTT
 A C G T C G T A G T A C C G T A C G T A C T G A A G C T C G T A C T G A C T G A T A G C A C G T A C T G G T A C A C G T
T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ACAARTAAACTGM
RNAACAATGG------
 A C G T A C G T A C G T C G T A G T A C C G T A C G T A C T G A A G C T C G T A C T G A C T G A T A G C A C G T A C T G G T A C
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----ACAARTAAACTGM
ATAAACAATTAAACA--
 A C G T A C G T A C G T A C G T C G T A G T A C C G T A C G T A C T G A A G C T C G T A C T G A C T G A T A G C A C G T A C T G G T A C
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----ACAARTAAACTGM
GTAAACAAT--------
 A C G T A C G T A C G T A C G T C G T A G T A C C G T A C G T A C T G A A G C T C G T A C T G A C T G A T A G C A C G T A C T G G T A C
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----ACAARTAAACTGM
NNNTAACAATTATAN---
 A C G T A C G T A C G T A C G T A C G T C G T A G T A C C G T A C G T A C T G A A G C T C G T A C T G A C T G A T A G C A C G T A C T G G T A C
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ACAARTAAACTGM
ACAAAG-------
 C G T A G T A C C G T A C G T A C T G A A G C T C G T A C T G A C T G A T A G C A C G T A C T G G T A C
G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SOX21/MA0866.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ACAARTAAACTGM-
AACAATGGTAGTGTT
 A C G T C G T A G T A C C G T A C G T A C T G A A G C T C G T A C T G A C T G A T A G C A C G T A C T G G T A C A C G T
C T G A T C G A A T G C T C G A T C G A C A G T C A T G C A T G G A C T T C G A C A T G C G A T C T A G C A G T A G C T