Information for 10-AGAAAGGTGAGTG (Motif 16)

C T G A A C T G C G T A C G T A C G T A A C T G A C T G C G A T A C T G C G T A A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A C G T A G T C C G T A A G T C A G T C A C G T C G A T A C G T A G T C A G C T
p-value:1e-8
log p-value:-2.044e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.2 +/- 27.4bp
Average Position of motif in Background53.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.68
Offset:3
Orientation:forward strand
Alignment:AGAAAGGTGAGTG-
---CAGGTAAGTAT
 C T G A A C T G C G T A C G T A C G T A A C T G A C T G C G A T A C T G C G T A A C T G A C G T A C T G A C G T
A C G T A C G T A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AGAAAGGTGAGTG
GGAGAAAGGTGCGA-
 A C G T A C G T C T G A A C T G C G T A C G T A C G T A A C T G A C T G C G A T A C T G C G T A A C T G A C G T A C T G
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGAAAGGTGAGTG
AGAAACGAAAGT-
 C T G A A C T G C G T A C G T A C G T A A C T G A C T G C G A T A C T G C G T A A C T G A C G T A C T G
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGAAAGGTGAGTG
ANGNAAAGGTCA---
 A C G T A C G T C T G A A C T G C G T A C G T A C G T A A C T G A C T G C G A T A C T G C G T A A C T G A C G T A C T G
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T

KLF13/MA0657.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AGAAAGGTGAGTG----
CAAAAAGGGGCGTGGCAT
 A C G T C T G A A C T G C G T A C G T A C G T A A C T G A C T G C G A T A C T G C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T
G T A C G T C A G T C A G T C A C T G A C T G A C A T G C T A G A C T G C T A G G A T C T A C G A G C T C A T G C A T G G A T C G T C A G A C T

ZEB1/MA0103.2/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AGAAAGGTGAGTG
---CAGGTGAGG-
 C T G A A C T G C G T A C G T A C G T A A C T G A C T G C G A T A C T G C G T A A C T G A C G T A C T G
A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:7
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:AGAAAGGTGAGTG---
-----CTTGAGTGGCT
 C T G A A C T G C G T A C G T A C G T A A C T G A C T G C G A T A C T G C G T A A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:8
Score:0.57
Offset:6
Orientation:forward strand
Alignment:AGAAAGGTGAGTG---
------TTRAGTGSYK
 C T G A A C T G C G T A C G T A C G T A A C T G A C T G C G A T A C T G C G T A A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:9
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:AGAAAGGTGAGTG---
------TTAAGTGCTT
 C T G A A C T G C G T A C G T A C G T A A C T G A C T G C G A T A C T G C G T A A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AGAAAGGTGAGTG-
---AAGGCAAGTGT
 C T G A A C T G C G T A C G T A C G T A A C T G A C T G C G A T A C T G C G T A A C T G A C G T A C T G A C G T
A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T