p-value: | 1e-2 |
log p-value: | -6.600e+00 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 1.0 |
Percentage of Target Sequences with motif | 3.12% |
Number of Background Sequences with motif | 2.7 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 49.0 +/- 0.0bp |
Average Position of motif in Background | 81.1 +/- 15.1bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
Match Rank: | 1 |
Score: | 0.80 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CCATGCATAT-- --ATGMATATDC |
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Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer
Match Rank: | 2 |
Score: | 0.76 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CCATGCATAT-- --ATGAATATTC |
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OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer
Match Rank: | 3 |
Score: | 0.72 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CCATGCATAT------ -YATGCATATRCATRT |
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POU2F2/MA0507.1/Jaspar
Match Rank: | 4 |
Score: | 0.72 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CCATGCATAT--- ATATGCAAATNNN |
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OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
Match Rank: | 5 |
Score: | 0.70 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CCATGCATAT---- CTCATGAATATTCAT |
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PH0148.1_Pou3f3/Jaspar
Match Rank: | 6 |
Score: | 0.68 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CCATGCATAT---- AAAATATGCATAATAAA |
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POU5F1B/MA0792.1/Jaspar
Match Rank: | 7 |
Score: | 0.67 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CCATGCATAT -TATGCAAAT |
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Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
Match Rank: | 8 |
Score: | 0.67 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CCATGCATAT--- -TATGCWAATBAV |
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PH0144.1_Pou2f2/Jaspar
Match Rank: | 9 |
Score: | 0.67 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CCATGCATAT---- TTGTATGCAAATTAGA |
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Pou2f3/MA0627.1/Jaspar
Match Rank: | 10 |
Score: | 0.67 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CCATGCATAT---- TTGTATGCAAATTAGA |
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