Information for 1-AKRKTMGTAS (Motif 27)

C G T A A C G T C T A G A C G T A C G T T G A C A C T G A C G T C G T A A T G C
Reverse Opposite:
A T C G A C G T C G T A A G T C A C G T C G T A G T C A A G T C G T C A A C G T
p-value:1e-4
log p-value:-1.137e+01
Information Content per bp:1.809
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif9.38%
Number of Background Sequences with motif63.2
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets34.3 +/- 21.6bp
Average Position of motif in Background49.8 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0096.1_Zfp187_1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AKRKTMGTAS----
TTATTAGTACATAN
 C G T A A C G T C T A G A C G T A C G T T G A C A C T G A C G T C G T A A T G C A C G T A C G T A C G T A C G T
C A G T C G A T C G T A G A C T C G A T T C G A C T A G G A C T G C T A A G T C C T G A A G C T C T G A T C G A

PB0136.1_IRC900814_2/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AKRKTMGTAS--
ATGGAAAGTCGTAAAA
 A C G T A C G T A C G T A C G T C G T A A C G T C T A G A C G T A C G T T G A C A C T G A C G T C G T A A T G C A C G T A C G T
C T G A A G C T A C T G C T A G C T G A T C G A G T C A A C T G G A C T A G T C C A T G A C G T C T G A C G T A T C G A G C T A

PH0077.1_Hoxd12/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AKRKTMGTAS------
CAAGGTCGTAAAATCTT
 A C G T C G T A A C G T C T A G A C G T A C G T T G A C A C T G A C G T C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T

PH0066.1_Hoxc11/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AKRKTMGTAS-----
TAAAGTCGTAAAATAG
 A C G T C G T A A C G T C T A G A C G T A C G T T G A C A C T G A C G T C G T A A T G C A C G T A C G T A C G T A C G T A C G T
G A C T C T G A C G T A C T G A T C A G A G C T G A T C C T A G A C G T C G T A C G T A C G T A G C T A G A C T C T G A C A T G

HOXC12/MA0906.1/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AKRKTMGTAS---
--GGTCGTAAAAA
 C G T A A C G T C T A G A C G T A C G T T G A C A C T G A C G T C G T A A T G C A C G T A C G T A C G T
A C G T A C G T C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A

PB0094.1_Zfp128_1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AKRKTMGTAS-----
TCTTTGGCGTACCCTAA
 A C G T A C G T C G T A A C G T C T A G A C G T A C G T T G A C A C T G A C G T C G T A A T G C A C G T A C G T A C G T A C G T A C G T
A C G T G A T C G C A T C A G T C A G T C A T G C T A G A G T C C T A G A C G T C G T A G T A C T A G C A G T C A G C T G T C A C T G A

PH0067.1_Hoxc12/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AKRKTMGTAS------
TTAGGTCGTAAAATTTC
 A C G T C G T A A C G T C T A G A C G T A C G T T G A C A C T G A C G T C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G C A T T C G A T C A G T C A G A G C T G T A C C T A G A C G T G C T A C G T A G C T A G C T A G C A T A G C T C G A T G A T C

PB0032.1_IRC900814_1/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----AKRKTMGTAS--
GNNATTTGTCGTAANN
 A C G T A C G T A C G T A C G T C G T A A C G T C T A G A C G T A C G T T G A C A C T G A C G T C G T A A T G C A C G T A C G T
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T

PH0047.1_Hoxa11/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AKRKTMGTAS-----
TAAAGTCGTAAAACAT
 A C G T C G T A A C G T C T A G A C G T A C G T T G A C A C T G A C G T C G T A A T G C A C G T A C G T A C G T A C G T A C G T
G C A T C T G A G C T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C C T G A A C G T

HOXD12/MA0873.1/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AKRKTMGTAS---
--AGTCGTAAAAA
 C G T A A C G T C T A G A C G T A C G T T G A C A C T G A C G T C G T A A T G C A C G T A C G T A C G T
A C G T A C G T T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A