Information for 16-RCYGCTTGRTKCSGYY (Motif 24)

C T G A A T G C A G T C A C T G A G T C A C G T A C G T A C T G C T A G A C G T A C G T A G T C A T C G A C T G A G C T A G C T
Reverse Opposite:
C T G A C T G A A G T C A T G C A C T G G T C A C G T A G A C T A G T C G T C A C G T A A C T G A G T C C T A G A T C G A G C T
p-value:1e-5
log p-value:-1.311e+01
Information Content per bp:1.820
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.7 +/- 33.4bp
Average Position of motif in Background66.7 +/- 13.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYB/MA0502.1/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:RCYGCTTGRTKCSGYY
-CTGATTGGTCNATTT
 C T G A A T G C A G T C A C T G A G T C A C G T A C G T A C T G C T A G A C G T A C G T A G T C A T C G A C T G A G C T A G C T
A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

NFYA/MA0060.2/Jaspar

Match Rank:2
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----RCYGCTTGRTKCSGYY
AGAGTGCTGATTGGTCCA---
 A C G T A C G T A C G T A C G T A C G T C T G A A T G C A G T C A C T G A G T C A C G T A C G T A C T G C T A G A C G T A C G T A G T C A T C G A C T G A G C T A G C T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A A C G T A C G T A C G T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--RCYGCTTGRTKCSGYY
NNANTGATTGATNNNN--
 A C G T A C G T C T G A A T G C A G T C A C T G A G T C A C G T A C G T A C T G C T A G A C G T A C G T A G T C A T C G A C T G A G C T A G C T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C A C G T A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:RCYGCTTGRTKCSGYY-
NNNNGTTGATTGGGTCG
 C T G A A T G C A G T C A C T G A G T C A C G T A C G T A C T G C T A G A C G T A C G T A G T C A T C G A C T G A G C T A G C T A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

PB0144.1_Lef1_2/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--RCYGCTTGRTKCSGYY
NNANTGATTGATNTTN--
 A C G T A C G T C T G A A T G C A G T C A C T G A G T C A C G T A C G T A C T G C T A G A C G T A C G T A G T C A T C G A C T G A G C T A G C T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C A C G T A C G T

PH0016.1_Cux1_1/Jaspar

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:RCYGCTTGRTKCSGYY-
ACCGGTTGATCACCTGA
 C T G A A T G C A G T C A C T G A G T C A C G T A C G T A C T G C T A G A C G T A C G T A G T C A T C G A C T G A G C T A G C T A C G T
C T G A A T G C G A T C T C A G T C A G G A C T G C A T C T A G C T G A C G A T G A T C G C T A G T A C T A G C C G A T A T C G C T G A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.51
Offset:3
Orientation:forward strand
Alignment:RCYGCTTGRTKCSGYY
---YCTTTGTTCC---
 C T G A A T G C A G T C A C T G A G T C A C G T A C G T A C T G C T A G A C G T A C G T A G T C A T C G A C T G A G C T A G C T
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:forward strand
Alignment:RCYGCTTGRTKCSGYY
--TGCGTG--------
 C T G A A T G C A G T C A C T G A G T C A C G T A C G T A C T G C T A G A C G T A C G T A G T C A T C G A C T G A G C T A G C T
A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL001.1_MTE/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---RCYGCTTGRTKCSGYY
NCGACCGCTCCGCTCGAAA
 A C G T A C G T A C G T C T G A A T G C A G T C A C T G A G T C A C G T A C G T A C T G C T A G A C G T A C G T A G T C A T C G A C T G A G C T A G C T
T C A G A T G C C T A G C G T A A T G C A G T C A C T G G A C T A C G T A T G C A T G C A C T G A G T C A C G T A G T C A C T G C T G A C T G A T C G A

PBX1/MA0070.1/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:RCYGCTTGRTKCSGYY
TTTGATTGATGN----
 C T G A A T G C A G T C A C T G A G T C A C G T A C G T A C T G C T A G A C G T A C G T A G T C A T C G A C T G A G C T A G C T
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G A C G T A C G T A C G T A C G T