Information for 15-GCHGGGCWGMTGCCCW (Motif 23)

T C A G G T A C G C A T C T A G A T C G A C T G A G T C C G T A T C A G T G A C G C A T C A T G G A T C A G T C A G T C C G T A
Reverse Opposite:
C G A T C T A G A C T G C A T G G A T C C G T A A C T G A G T C C G A T T C A G G T A C A T G C G A T C C G A T A C T G A G T C
p-value:1e-5
log p-value:-1.320e+01
Information Content per bp:1.631
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif9.38%
Number of Background Sequences with motif34.8
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets36.2 +/- 7.1bp
Average Position of motif in Background51.3 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GCHGGGCWGMTGCCCW-----
-----GGGTGTGCCCAAAAGG
 T C A G G T A C G C A T C T A G A T C G A C T G A G T C C G T A T C A G T G A C G C A T C A T G G A T C A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCHGGGCWGMTGCCCW-
-CTTGGCANNNTGCCAA
 T C A G G T A C G C A T C T A G A T C G A C T G A G T C C G T A T C A G T G A C G C A T C A T G G A T C A G T C A G T C C G T A A C G T
A C G T A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.58
Offset:9
Orientation:forward strand
Alignment:GCHGGGCWGMTGCCCW--
---------CTGCCCGCA
 T C A G G T A C G C A T C T A G A T C G A C T G A G T C C G T A T C A G T G A C G C A T C A T G G A T C A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCHGGGCWGMTGCCCW
WDNCTGGGCA--------
 A C G T A C G T T C A G G T A C G C A T C T A G A T C G A C T G A G T C C G T A T C A G T G A C G C A T C A T G G A T C A G T C A G T C C G T A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GCHGGGCWGMTGCCCW
---AGGGGAATCCCCT
 T C A G G T A C G C A T C T A G A T C G A C T G A G T C C G T A T C A G T G A C G C A T C A T G G A T C A G T C A G T C C G T A
A C G T A C G T A C G T T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

HIC2/MA0738.1/Jaspar

Match Rank:6
Score:0.56
Offset:9
Orientation:forward strand
Alignment:GCHGGGCWGMTGCCCW--
---------ATGCCCACC
 T C A G G T A C G C A T C T A G A T C G A C T G A G T C C G T A T C A G T G A C G C A T C A T G G A T C A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GCHGGGCWGMTGCCCW
---GGGGGAATCCCC-
 T C A G G T A C G C A T C T A G A T C G A C T G A G T C C G T A T C A G T G A C G C A T C A T G G A T C A G T C A G T C C G T A
A C G T A C G T A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T

Spz1/MA0111.1/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GCHGGGCWGMTGCCCW
-----GCTGTTACCCT
 T C A G G T A C G C A T C T A G A T C G A C T G A G T C C G T A T C A G T G A C G C A T C A T G G A T C A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T

HES7/MA0822.1/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GCHGGGCWGMTGCCCW
---TGGCACGTGCCA-
 T C A G G T A C G C A T C T A G A T C G A C T G A G T C C G T A T C A G T G A C G C A T C A T G G A T C A G T C A G T C C G T A
A C G T A C G T A C G T G A C T T A C G C T A G A G T C C G T A A G T C A C T G A G C T C T A G A G T C A G T C C T G A A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GCHGGGCWGMTGCCCW-
---TGGCAGNCTGCCAG
 T C A G G T A C G C A T C T A G A T C G A C T G A G T C C G T A T C A G T G A C G C A T C A T G G A T C A G T C A G T C C G T A A C G T
A C G T A C G T A C G T C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G