Information for 10-CCCGCCGHGGAGG (Motif 21)

A G T C A G T C A G T C A C T G A G T C G A T C A C T G G C T A A C T G A C T G C G T A A C T G A T C G
Reverse Opposite:
A T G C A G T C C G A T A G T C G T A C C A G T G T A C C T A G A C T G G T A C A C T G C T A G A C T G
p-value:1e-6
log p-value:-1.424e+01
Information Content per bp:1.768
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif9.38%
Number of Background Sequences with motif24.3
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets34.0 +/- 19.8bp
Average Position of motif in Background50.7 +/- 21.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZIC1/MA0696.1/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CCCGCCGHGGAGG
GACCCCCCGCTGTG-
 A C G T A C G T A G T C A G T C A G T C A C T G A G T C G A T C A C T G G C T A A C T G A C T G C G T A A C T G A T C G
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CCCGCCGHGGAGG
GACCCCCCGCTGCGC
 A C G T A C G T A G T C A G T C A G T C A C T G A G T C G A T C A C T G G C T A A C T G A C T G C G T A A C T G A T C G
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

ZIC4/MA0751.1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CCCGCCGHGGAGG
GACCCCCCGCTGTGC
 A C G T A C G T A G T C A G T C A G T C A C T G A G T C G A T C A C T G G C T A A C T G A C T G C G T A A C T G A T C G
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

GLIS2/MA0736.1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCCGCCGHGGAGG
GACCCCCCGCGAAG-
 A C G T A C G T A G T C A G T C A G T C A C T G A G T C G A T C A C T G G C T A A C T G A C T G C G T A A C T G A T C G
A C T G T C G A A G T C G T A C G A T C G T A C G T A C G A T C C T A G A G T C C T A G C T G A G T C A A T C G A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCCGCCGHGGAGG-
CCCCCCCGGGGGGGT
 A C G T A G T C A G T C A G T C A C T G A G T C G A T C A C T G G C T A A C T G A C T G C G T A A C T G A T C G A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

PB0102.1_Zic2_1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCCGCCGHGGAGG-
CCCCCCCGGGGGGGT
 A C G T A G T C A G T C A G T C A C T G A G T C G A T C A C T G G C T A A C T G A C T G C G T A A C T G A T C G A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CCCGCCGHGGAGG
NYTTCCCGCC-------
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C T G A G T C G A T C A C T G G C T A A C T G A C T G C G T A A C T G A T C G
T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CCCGCCGHGGAGG
TACGCCCCGCCACTCTG-
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C T G A G T C G A T C A C T G G C T A A C T G A C T G C G T A A C T G A T C G
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T

E2F4/MA0470.1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CCCGCCGHGGAGG
NNTTCCCGCCC------
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C T G A G T C G A T C A C T G G C T A A C T G A C T G C G T A A C T G A T C G
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCCGCCGHGGAGG-
CCCCCCCGGGGGNN
 A G T C A G T C A G T C A C T G A G T C G A T C A C T G G C T A A C T G A C T G C G T A A C T G A T C G A C G T
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G