Information for 1-CGCGTGCRGC (Motif 3)

G T A C A C T G A G T C A T C G A C G T A C T G A G T C T C A G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C C T A G A G T C C G T A A T G C A C T G A G T C A C T G
p-value:1e-15
log p-value:-3.641e+01
Information Content per bp:1.866
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.06%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets42.4 +/- 27.4bp
Average Position of motif in Background34.7 +/- 10.2bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.78
Offset:0
Orientation:forward strand
Alignment:CGCGTGCRGC
TGCGTG----
 G T A C A C T G A G T C A T C G A C G T A C T G A G T C T C A G A C T G A G T C
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T

Hes1/MA1099.1/Jaspar

Match Rank:2
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--CGCGTGCRGC
NNCGCGTGNN--
 A C G T A C G T G T A C A C T G A G T C A T C G A C G T A C T G A G T C T C A G A C T G A G T C
C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CGCGTGCRGC
TTGCGTGCVA-
 A C G T G T A C A C T G A G T C A T C G A C G T A C T G A G T C T C A G A C T G A G T C
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T

PB0147.1_Max_2/Jaspar

Match Rank:4
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----CGCGTGCRGC
NNGTCGCGTGNCAC
 A C G T A C G T A C G T A C G T G T A C A C T G A G T C A T C G A C G T A C T G A G T C T C A G A C T G A G T C
G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CGCGTGCRGC
GGACGTGC---
 A C G T G T A C A C T G A G T C A T C G A C G T A C T G A G T C T C A G A C T G A G T C
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T

Tcfl5/MA0632.1/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CGCGTGCRGC
GGCACGTGCC--
 A C G T A C G T G T A C A C T G A G T C A T C G A C G T A C T G A G T C T C A G A C T G A G T C
C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CGCGTGCRGC
TGGGTGTGGC
 G T A C A C T G A G T C A T C G A C G T A C T G A G T C T C A G A C T G A G T C
C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C

TFAP2A/MA0003.3/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CGCGTGCRGC-
NGCCTGAGGCN
 G T A C A C T G A G T C A T C G A C G T A C T G A G T C T C A G A C T G A G T C A C G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

Arnt/MA0004.1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CGCGTGCRGC
CACGTG----
 G T A C A C T G A G T C A T C G A C G T A C T G A G T C T C A G A C T G A G T C
G T A C C T G A A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CGCGTGCRGC-
NTGGGTGTGGCC
 A C G T G T A C A C T G A G T C A T C G A C G T A C T G A G T C T C A G A C T G A G T C A C G T
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C