Information for 14-ATAGGGCACC (Motif 26)

T C G A C G A T T C G A C T A G C T A G A T C G A T G C C T G A A G T C T A G C
Reverse Opposite:
A T C G A C T G A G C T A T C G T A G C A G T C A G T C A G C T G C T A A C G T
p-value:1e-10
log p-value:-2.497e+01
Information Content per bp:1.685
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets46.7 +/- 21.7bp
Average Position of motif in Background45.0 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---ATAGGGCACC---
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T T C G A C G A T T C G A C T A G C T A G A T C G A T G C C T G A A G T C T A G C A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

PB0053.1_Rara_1/Jaspar

Match Rank:2
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----ATAGGGCACC--
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T A C G T T C G A C G A T T C G A C T A G C T A G A T C G A T G C C T G A A G T C T A G C A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:forward strand
Alignment:ATAGGGCACC
-AAGGTCAC-
 T C G A C G A T T C G A C T A G C T A G A T C G A T G C C T G A A G T C T A G C
A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-ATAGGGCACC
CAAAGGTCAG-
 A C G T T C G A C G A T T C G A C T A G C T A G A T C G A T G C C T G A A G T C T A G C
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:5
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----ATAGGGCACC--
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T A C G T T C G A C G A T T C G A C T A G C T A G A T C G A T G C C T G A A G T C T A G C A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ATAGGGCACC
TRAGGTCA--
 T C G A C G A T T C G A C T A G C T A G A T C G A T G C C T G A A G T C T A G C
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:7
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----ATAGGGCACC--
TGCGCATAGGGGAGGAG
 A C G T A C G T A C G T A C G T A C G T T C G A C G A T T C G A C T A G C T A G A T C G A T G C C T G A A G T C T A G C A C G T A C G T
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ATAGGGCACC
NGTGGGCAT-
 T C G A C G A T T C G A C T A G C T A G A T C G A T G C C T G A A G T C T A G C
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.64
Offset:2
Orientation:forward strand
Alignment:ATAGGGCACC
--AGGTCA--
 T C G A C G A T T C G A C T A G C T A G A T C G A T G C C T G A A G T C T A G C
A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ATAGGGCACC
AAYTAGGTCA--
 A C G T A C G T T C G A C G A T T C G A C T A G C T A G A T C G A T G C C T G A A G T C T A G C
G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T A C G T