Information for 8-AAAGTGCCTC (Motif 12)

C G T A G T C A C G T A A C T G A C G T A T C G A G T C T A G C C G A T A T G C
Reverse Opposite:
A T C G C G T A A C T G T A C G A T G C G T C A A G T C A C G T A C G T G A C T
p-value:1e-13
log p-value:-3.131e+01
Information Content per bp:1.838
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets50.1 +/- 28.2bp
Average Position of motif in Background52.1 +/- 20.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AAAGTGCCTC
TTAAGTGCTT-
 A C G T C G T A G T C A C G T A A C T G A C G T A T C G A G T C T A G C C G A T A T G C
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AAAGTGCCTC
TTAAGTGC---
 A C G T C G T A G T C A C G T A A C T G A C G T A T C G A G T C T A G C C G A T A T G C
G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAAGTGCCTC
TTRAGTGSYK-
 A C G T C G T A G T C A C G T A A C T G A C G T A T C G A G T C T A G C C G A T A T G C
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AAAGTGCCTC
TTAAGTGGN--
 A C G T C G T A G T C A C G T A A C T G A C G T A T C G A G T C T A G C C G A T A T G C
G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AAAGTGCCTC
TTGAGTGSTT-
 A C G T C G T A G T C A C G T A A C T G A C G T A T C G A G T C T A G C C G A T A T G C
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AAAGTGCCTC
NTCAAGTGGN--
 A C G T A C G T C G T A G T C A C G T A A C T G A C G T A T C G A G T C T A G C C G A T A T G C
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AAAGTGCCTC
NTCAAGTGG---
 A C G T A C G T C G T A G T C A C G T A A C T G A C G T A T C G A G T C T A G C C G A T A T G C
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AAAGTGCCTC
TTAAGTGGT--
 A C G T C G T A G T C A C G T A A C T G A C G T A T C G A G T C T A G C C G A T A T G C
G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----AAAGTGCCTC-
AATNTTAAGTGGNTNN
 A C G T A C G T A C G T A C G T A C G T C G T A G T C A C G T A A C T G A C G T A T C G A G T C T A G C C G A T A T G C A C G T
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A

PB0146.1_Mafk_2/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AAAGTGCCTC-
GAAAAAATTGCAAGG
 A C G T A C G T A C G T A C G T C G T A G T C A C G T A A C T G A C G T A T C G A G T C T A G C C G A T A T G C A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G