Information for 8-CAAAACCMGCAAC (Motif 19)

A T G C G T C A G T C A G T C A T C G A A T G C G T A C G T A C A T C G A G T C T C G A C T G A G T A C
Reverse Opposite:
A C T G A G C T A G C T A C T G T A G C C A T G C A T G A T C G A G C T A C G T A C G T A C G T A T C G
p-value:1e-7
log p-value:-1.686e+01
Information Content per bp:1.690
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.41%
Number of Background Sequences with motif90.8
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets51.8 +/- 16.0bp
Average Position of motif in Background52.9 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CAAAACCMGCAAC-
GAAAAAATTGCAAGG
 A C G T A T G C G T C A G T C A G T C A T C G A A T G C G T A C G T A C A T C G A G T C T C G A C T G A G T A C A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

PB0024.1_Gcm1_1/Jaspar

Match Rank:2
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CAAAACCMGCAAC---
TCGTACCCGCATCATT
 A T G C G T C A G T C A G T C A T C G A A T G C G T A C G T A C A T C G A G T C T C G A C T G A G T A C A C G T A C G T A C G T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

GCM2/MA0767.1/Jaspar

Match Rank:3
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CAAAACCMGCAAC
---TACCCGCATN
 A T G C G T C A G T C A G T C A T C G A A T G C G T A C G T A C A T C G A G T C T C G A C T G A G T A C
A C G T A C G T A C G T G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:4
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CAAAACCMGCAAC
--TBGCACGCAA-
 A T G C G T C A G T C A G T C A T C G A A T G C G T A C G T A C A T C G A G T C T C G A C T G A G T A C
A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T

RREB1/MA0073.1/Jaspar

Match Rank:5
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---CAAAACCMGCAAC----
CCCCAAACCACCCCCCCCCA
 A C G T A C G T A C G T A T G C G T C A G T C A G T C A T C G A A T G C G T A C G T A C A T C G A G T C T C G A C T G A G T A C A C G T A C G T A C G T A C G T
G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CAAAACCMGCAAC--
---SCCTAGCAACAG
 A T G C G T C A G T C A G T C A T C G A A T G C G T A C G T A C A T C G A G T C T C G A C T G A G T A C A C G T A C G T
A C G T A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---CAAAACCMGCAAC
TGCCAAAATAAACANN
 A C G T A C G T A C G T A T G C G T C A G T C A G T C A T C G A A T G C G T A C G T A C A T C G A G T C T C G A C T G A G T A C
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

PB0035.1_Irf5_1/Jaspar

Match Rank:8
Score:0.49
Offset:-6
Orientation:forward strand
Alignment:------CAAAACCMGCAAC
ATAAACCGAAACCAA----
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C G T C A G T C A G T C A T C G A A T G C G T A C G T A C A T C G A G T C T C G A C T G A G T A C
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A A C G T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:9
Score:0.49
Offset:3
Orientation:forward strand
Alignment:CAAAACCMGCAAC
---AAACCGCAA-
 A T G C G T C A G T C A G T C A T C G A A T G C G T A C G T A C A T C G A G T C T C G A C T G A G T A C
A C G T A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:10
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--CAAAACCMGCAAC
TCCCAGMCRAGCCCC
 A C G T A C G T A T G C G T C A G T C A G T C A T C G A A T G C G T A C G T A C A T C G A G T C T C G A C T G A G T A C
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C