Information for 4-GCGGCCATCTTGG (Motif 8)

C A T G T A G C T A C G A C T G T A G C G A T C T C G A G A C T A T G C G A C T C A G T A C T G A T C G
Reverse Opposite:
T A G C T G A C G C T A C T G A A T C G C T G A A G C T C A T G A T C G T A G C A T G C A T C G G T A C
p-value:1e-13
log p-value:-3.199e+01
Information Content per bp:1.659
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.36%
Number of Background Sequences with motif213.6
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets55.6 +/- 25.1bp
Average Position of motif in Background51.4 +/- 33.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:GCGGCCATCTTGG
GCCGCCATCTTG-
 C A T G T A G C T A C G A C T G T A G C G A T C T C G A G A C T A T G C G A C T C A G T A C T G A T C G
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:GCGGCCATCTTGG
GCNGCCATCTTG-
 C A T G T A G C T A C G A C T G T A G C G A T C T C G A G A C T A T G C G A C T C A G T A C T G A T C G
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GCGGCCATCTTGG
---GCCATCTGTT
 C A T G T A G C T A C G A C T G T A G C G A T C T C G A G A C T A T G C G A C T C A G T A C T G A T C G
A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCGGCCATCTTGG---
CCNNACCATCTGGCCTN
 A C G T C A T G T A G C T A C G A C T G T A G C G A T C T C G A G A C T A T G C G A C T C A G T A C T G A T C G A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

YY2/MA0748.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCGGCCATCTTGG
GTCCGCCATTA---
 A C G T C A T G T A G C T A C G A C T G T A G C G A T C T C G A G A C T A T G C G A C T C A G T A C T G A T C G
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GCGGCCATCTTGG
---ACCATCTGTT
 C A T G T A G C T A C G A C T G T A G C G A T C T C G A G A C T A T G C G A C T C A G T A C T G A T C G
A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCGGCCATCTTGG-----
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T C A T G T A G C T A C G A C T G T A G C G A T C T C G A G A C T A T G C G A C T C A G T A C T G A T C G A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GCGGCCATCTTGG---
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T C A T G T A G C T A C G A C T G T A G C G A T C T C G A G A C T A T G C G A C T C A G T A C T G A T C G A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GCGGCCATCTTGG--
---GCCAGCTGBTNB
 C A T G T A G C T A C G A C T G T A G C G A T C T C G A G A C T A T G C G A C T C A G T A C T G A T C G A C G T A C G T
A C G T A C G T A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

E2F2/MA0864.1/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----GCGGCCATCTTGG
AAAATGGCGCCATTTT--
 A C G T A C G T A C G T A C G T A C G T C A T G T A G C T A C G A C T G T A G C G A T C T C G A G A C T A T G C G A C T C A G T A C T G A T C G
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C T A G C G C T A G C A T C G A T C G A T C G A T A C G T A C G T