Information for 6-ATGCAAYTGCATT (Motif 11)

G T C A A C G T A C T G A T G C C G T A C T G A G A C T C A G T A C T G G A T C G C T A C A G T A G C T
Reverse Opposite:
T C G A G T C A C G A T C T A G T A G C G C T A C T G A G A C T G C A T A T C G A G T C T G C A C A G T
p-value:1e-10
log p-value:-2.368e+01
Information Content per bp:1.668
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif18.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets39.2 +/- 23.6bp
Average Position of motif in Background57.5 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU2F2/MA0507.1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--ATGCAAYTGCATT
ATATGCAAATNNN--
 A C G T A C G T G T C A A C G T A C T G A T G C C G T A C T G A G A C T C A G T A C T G G A T C G C T A C A G T A G C T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--ATGCAAYTGCATT
AYATGYATATGCATR
 A C G T A C G T G T C A A C G T A C T G A T G C C G T A C T G A G A C T C A G T A C T G G A T C G C T A C A G T A G C T
C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ATGCAAYTGCATT
TTATGCAAAT-----
 A C G T A C G T G T C A A C G T A C T G A T G C C G T A C T G A G A C T C A G T A C T G G A T C G C T A C A G T A G C T
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

PB0169.1_Sox15_2/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ATGCAAYTGCATT---
-TNGAATTTCATTNAN
 G T C A A C G T A C T G A T G C C G T A C T G A G A C T C A G T A C T G G A T C G C T A C A G T A G C T A C G T A C G T A C G T
A C G T A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ATGCAAYTGCATT
ATATGCAAAT-----
 A C G T A C G T G T C A A C G T A C T G A T G C C G T A C T G A G A C T C A G T A C T G G A T C G C T A C A G T A G C T
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ATGCAAYTGCATT-
--GGGATTGCATNN
 G T C A A C G T A C T G A T G C C G T A C T G A G A C T C A G T A C T G G A T C G C T A C A G T A G C T A C G T
A C G T A C G T T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

Pou2f3/MA0627.1/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ATGCAAYTGCATT
TTGTATGCAAATTAGA-
 A C G T A C G T A C G T A C G T G T C A A C G T A C T G A T G C C G T A C T G A G A C T C A G T A C T G G A T C G C T A C A G T A G C T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ATGCAAYTGCATT
TTGTATGCAAATTAGA-
 A C G T A C G T A C G T A C G T G T C A A C G T A C T G A T G C C G T A C T G A G A C T C A G T A C T G G A T C G C T A C A G T A G C T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATGCAAYTGCATT
CTCATGAATATTCAT-
 A C G T A C G T A C G T G T C A A C G T A C T G A T G C C G T A C T G A G A C T C A G T A C T G G A T C G C T A C A G T A G C T
T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ATGCAAYTGCATT
WATGCAAATGAG--
 A C G T G T C A A C G T A C T G A T G C C G T A C T G A G A C T C A G T A C T G G A T C G C T A C A G T A G C T
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T A C G T