Information for 1-TKTGRAGCAGKCAGGC (Motif 1)

A C G T A C G T A C G T T C A G C T G A C G T A A C T G A G T C T G C A A C T G A C G T G T A C C T G A A C T G A C T G A T G C
Reverse Opposite:
A T C G A G T C G T A C A G C T A C T G G T C A T G A C A C G T C T A G A G T C A C G T A G C T A G T C C G T A G T C A G T C A
p-value:1e-18
log p-value:-4.250e+01
Information Content per bp:1.738
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.6 +/- 23.8bp
Average Position of motif in Background29.3 +/- 6.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0111.1_Nkx2-2/Jaspar

Match Rank:1
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---TKTGRAGCAGKCAGGC
NANTTTCAAGTGGTTAN--
 A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T G A C G T A A C T G A G T C T G C A A C T G A C G T G T A C C T G A A C T G A C T G A T G C
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:2
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:TKTGRAGCAGKCAGGC-----
------SCAGYCADGCATGAC
 A C G T A C G T A C G T T C A G C T G A C G T A A C T G A G T C T G C A A C T G A C G T G T A C C T G A A C T G A C T G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

NKX2-8/MA0673.1/Jaspar

Match Rank:3
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TKTGRAGCAGKCAGGC
-NTCAAGTGG------
 A C G T A C G T A C G T T C A G C T G A C G T A A C T G A G T C T G C A A C T G A C G T G T A C C T G A A C T G A C T G A T G C
A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.50
Offset:4
Orientation:forward strand
Alignment:TKTGRAGCAGKCAGGC
----CAGCC-------
 A C G T A C G T A C G T T C A G C T G A C G T A A C T G A G T C T G C A A C T G A C G T G T A C C T G A A C T G A C T G A T G C
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:5
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:TKTGRAGCAGKCAGGC
TTTGAAACCG------
 A C G T A C G T A C G T T C A G C T G A C G T A A C T G A G T C T G C A A C T G A C G T G T A C C T G A A C T G A C T G A T G C
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:TKTGRAGCAGKCAGGC
-CTYRAGTGSY-----
 A C G T A C G T A C G T T C A G C T G A C G T A A C T G A G T C T G C A A C T G A C G T G T A C C T G A A C T G A C T G A T G C
A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---TKTGRAGCAGKCAGGC
GRTGMTRGAGCC-------
 A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T G A C G T A A C T G A G T C T G C A A C T G A C G T G T A C C T G A A C T G A C T G A T G C
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:8
Score:0.48
Offset:1
Orientation:forward strand
Alignment:TKTGRAGCAGKCAGGC--
-GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T T C A G C T G A C G T A A C T G A G T C T G C A A C T G A C G T G T A C C T G A A C T G A C T G A T G C A C G T A C G T
A C G T T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:9
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:TKTGRAGCAGKCAGGC--
----NTGCCCTTGGGCGN
 A C G T A C G T A C G T T C A G C T G A C G T A A C T G A G T C T G C A A C T G A C G T G T A C C T G A A C T G A C T G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:10
Score:0.48
Offset:1
Orientation:forward strand
Alignment:TKTGRAGCAGKCAGGC
-BTBRAGTGSN-----
 A C G T A C G T A C G T T C A G C T G A C G T A A C T G A G T C T G C A A C T G A C G T G T A C C T G A A C T G A C T G A T G C
A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T A C G T A C G T