Information for 4-CCCTCACTGACAC (Motif 7)

A G T C G T A C A T G C A C G T A T G C C T G A G T A C C A G T A C T G G T C A A T G C C G T A A G T C
Reverse Opposite:
C T A G A C G T A T C G A C G T A G T C G C T A C A T G A G C T A T C G G T C A A T C G A C T G A C T G
p-value:1e-9
log p-value:-2.136e+01
Information Content per bp:1.828
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif2.35%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.3 +/- 19.7bp
Average Position of motif in Background40.0 +/- 15.6bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCCTCACTGACAC---
CAATCACTGGCAGAAT
 A G T C G T A C A T G C A C G T A T G C C T G A G T A C C A G T A C T G G T C A A T G C C G T A A G T C A C G T A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.61
Offset:6
Orientation:forward strand
Alignment:CCCTCACTGACAC
------TTGACAG
 A G T C G T A C A T G C A C G T A T G C C T G A G T A C C A G T A C T G G T C A A T G C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCCTCACTGACAC-
--BTGABTGACAGS
 A G T C G T A C A T G C A C G T A T G C C T G A G T A C C A G T A C T G G T C A A T G C C G T A A G T C A C G T
A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CCCTCACTGACAC
----ARNTGACA-
 A G T C G T A C A T G C A C G T A T G C C T G A G T A C C A G T A C T G G T C A A T G C C G T A A G T C
A C G T A C G T A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T

PH0164.1_Six4/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CCCTCACTGACAC------
--ATAAATGACACCTATCA
 A G T C G T A C A T G C A C G T A T G C C T G A G T A C C A G T A C T G G T C A A T G C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CCCTCACTGACAC-
--NTGATTGACAGN
 A G T C G T A C A T G C A C G T A T G C C T G A G T A C C A G T A C T G G T C A A T G C C G T A A G T C A C G T
A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:7
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CCCTCACTGACAC--
NNNTGAACTCNNTGACCTCN
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C A T G C A C G T A T G C C T G A G T A C C A G T A C T G G T C A A T G C C G T A A G T C A C G T A C G T
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CCCTCACTGACAC--
-----VBTGWCAGCB
 A G T C G T A C A T G C A C G T A T G C C T G A G T A C C A G T A C T G G T C A A T G C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

MEIS3/MA0775.1/Jaspar

Match Rank:9
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CCCTCACTGACAC-
------TTGACAGG
 A G T C G T A C A T G C A C G T A T G C C T G A G T A C C A G T A C T G G T C A A T G C C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CCCTCACTGACAC
-----RHTGWCAR
 A G T C G T A C A T G C A C G T A T G C C T G A G T A C C A G T A C T G G T C A A T G C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A