Information for 5-CTAGCTTGTA (Motif 21)

A G T C A G C T C G T A A C T G A T G C A C G T A C G T A C T G A G C T G T C A
Reverse Opposite:
A C G T T C G A A G T C C G T A C G T A A T C G G T A C A C G T C T G A A C T G
p-value:1e-9
log p-value:-2.220e+01
Information Content per bp:1.868
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif15.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets58.2 +/- 17.3bp
Average Position of motif in Background45.8 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTAGCTTGTA
-AAGCTTG--
 A G T C A G C T C G T A A C T G A T G C A C G T A C G T A C T G A G C T G T C A
A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CTAGCTTGTA
GCNGCCATCTTG--
 A C G T A C G T A C G T A C G T A G T C A G C T C G T A A C T G A T G C A C G T A C G T A C T G A G C T G T C A
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T

Mecom/MA0029.1/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CTAGCTTGTA--
TNTTATCTTATCTT
 A C G T A C G T A G T C A G C T C G T A A C T G A T G C A C G T A C G T A C T G A G C T G T C A A C G T A C G T
A C G T T A C G A G C T C G A T C T G A A C G T A G T C A G C T A C G T C T G A A C G T T A G C G C A T G A C T

PB0181.1_Spdef_2/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CTAGCTTGTA---
CTACTAGGATGTNNTN
 A C G T A C G T A C G T A G T C A G C T C G T A A C T G A T G C A C G T A C G T A C T G A G C T G T C A A C G T A C G T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

YY1(Zf)/Promoter/Homer

Match Rank:5
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CTAGCTTGTA
GCCGCCATCTTG--
 A C G T A C G T A C G T A C G T A G T C A G C T C G T A A C T G A T G C A C G T A C G T A C T G A G C T G T C A
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CTAGCTTGTA
CCAGCTGTTN
 A G T C A G C T C G T A A C T G A T G C A C G T A C G T A C T G A G C T G T C A
T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

SRY/MA0084.1/Jaspar

Match Rank:7
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:CTAGCTTGTA---
----ATTGTTTAN
 A G T C A G C T C G T A A C T G A T G C A C G T A C G T A C T G A G C T G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:8
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CTAGCTTGTA-
-TTGCGTGCVA
 A G T C A G C T C G T A A C T G A T G C A C G T A C G T A C T G A G C T G T C A A C G T
A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:9
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CTAGCTTGTA
--TGCGTG--
 A G T C A G C T C G T A A C T G A T G C A C G T A C G T A C T G A G C T G T C A
A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:10
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-CTAGCTTGTA-
GCCAGCTGBTNB
 A C G T A G T C A G C T C G T A A C T G A T G C A C G T A C G T A C T G A G C T G T C A A C G T
T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C