Information for 6-CCTGGAGCGTGSCGGC (Motif 17)

A G T C A G T C A C G T A T C G A C T G G T C A A T C G T G A C A C T G A G C T A C T G T A G C A T G C A T C G A T C G A G T C
Reverse Opposite:
C T A G A T G C A T G C T A C G A T C G G T A C T C G A G T A C A C T G A T G C A C G T A G T C A T G C G T C A A C T G A C T G
p-value:1e-7
log p-value:-1.798e+01
Information Content per bp:1.795
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif8.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets42.7 +/- 24.4bp
Average Position of motif in Background71.2 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCTGGAGCGTGSCGGC
TCAGNGAGCGTGAC---
 A C G T A G T C A G T C A C G T A T C G A C T G G T C A A T C G T G A C A C T G A G C T A C T G T A G C A T G C A T C G A T C G A G T C
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C A C G T A C G T A C G T

HES5/MA0821.1/Jaspar

Match Rank:2
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CCTGGAGCGTGSCGGC
--TGGCACGTGCCG--
 A G T C A G T C A C G T A T C G A C T G G T C A A T C G T G A C A C T G A G C T A C T G T A G C A T G C A T C G A T C G A G T C
A C G T A C G T G A C T T C A G T C A G A G T C C T G A A G T C C A T G A G C T A C T G A G T C A G T C C T A G A C G T A C G T

HES7/MA0822.1/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CCTGGAGCGTGSCGGC
--TGGCACGTGCCA--
 A G T C A G T C A C G T A T C G A C T G G T C A A T C G T G A C A C T G A G C T A C T G T A G C A T G C A T C G A T C G A G T C
A C G T A C G T G A C T T A C G C T A G A G T C C G T A A G T C A C T G A G C T C T A G A G T C A G T C C T G A A C G T A C G T

Hes1/MA1099.1/Jaspar

Match Rank:4
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CCTGGAGCGTGSCGGC
---NNCGCGTGNN---
 A G T C A G T C A C G T A T C G A C T G G T C A A T C G T G A C A C T G A G C T A C T G T A G C A T G C A T C G A T C G A G T C
A C G T A C G T A C G T C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C A C G T A C G T A C G T

PB0147.1_Max_2/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CCTGGAGCGTGSCGGC
-NNGTCGCGTGNCAC-
 A G T C A G T C A C G T A T C G A C T G G T C A A T C G T G A C A C T G A G C T A C T G T A G C A T G C A T C G A T C G A G T C
A C G T G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:6
Score:0.51
Offset:5
Orientation:forward strand
Alignment:CCTGGAGCGTGSCGGC
-----TGCGTG-----
 A G T C A G T C A C G T A T C G A C T G G T C A A T C G T G A C A C T G A G C T A C T G T A G C A T G C A T C G A T C G A G T C
A C G T A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T

KLF16/MA0741.1/Jaspar

Match Rank:7
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CCTGGAGCGTGSCGGC
--GGGGGCGTGGC---
 A G T C A G T C A C G T A T C G A C T G G T C A A T C G T G A C A C T G A G C T A C T G T A G C A T G C A T C G A T C G A G T C
A C G T A C G T C T A G C A T G C T A G A T C G A C T G G A T C C A T G A C G T C A T G C A T G A G T C A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---CCTGGAGCGTGSCGGC
GRTGMTRGAGCC-------
 A C G T A C G T A C G T A G T C A G T C A C G T A T C G A C T G G T C A A T C G T G A C A C T G A G C T A C T G T A G C A T G C A T C G A T C G A G T C
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:9
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---CCTGGAGCGTGSCGGC
TTTCCTAGAAAGCA-----
 A C G T A C G T A C G T A G T C A G T C A C G T A T C G A C T G G T C A A T C G T G A C A C T G A G C T A C T G T A G C A T G C A T C G A T C G A G T C
C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:CCTGGAGCGTGSCGGC
--CGGAGC--------
 A G T C A G T C A C G T A T C G A C T G G T C A A T C G T G A C A C T G A G C T A C T G T A G C A T G C A T C G A T C G A G T C
A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T