Information for 3-CAGCTATTTG (Motif 8)

A T G C C T G A C T A G A G T C G A C T G C T A A G C T C G A T A G C T A C T G
Reverse Opposite:
T G A C C T G A C G T A C T G A C G A T C T G A T C A G G A T C G A C T A T C G
p-value:1e-10
log p-value:-2.396e+01
Information Content per bp:1.715
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif8.14%
Number of Background Sequences with motif324.4
Percentage of Background Sequences with motif0.71%
Average Position of motif in Targets48.9 +/- 24.6bp
Average Position of motif in Background51.8 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CAGCTATTTG----
--KCTATTTTTRGH
 A T G C C T G A C T A G A G T C G A C T G C T A A G C T C G A T A G C T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CAGCTATTTG----
--GCTATTTTTGGM
 A T G C C T G A C T A G A G T C G A C T G C T A A G C T C G A T A G C T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

MEF2C/MA0497.1/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CAGCTATTTG------
-TTCTATTTTTAGNNN
 A T G C C T G A C T A G A G T C G A C T G C T A A G C T C G A T A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CAGCTATTTG
CAGCTGTT--
 A T G C C T G A C T A G A G T C G A C T G C T A A G C T C G A T A G C T A C T G
A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CAGCTATTTG---
---CTATTTTTGG
 A T G C C T G A C T A G A G T C G A C T G C T A A G C T C G A T A G C T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CAGCTATTTG
CCAGCTGTTN-
 A C G T A T G C C T G A C T A G A G T C G A C T G C T A A G C T C G A T A G C T A C T G
T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T

MSC/MA0665.1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CAGCTATTTG
AACAGCTGTT--
 A C G T A C G T A T G C C T G A C T A G A G T C G A C T G C T A A G C T C G A T A G C T A C T G
C T G A T G C A A T G C C G T A A T C G A T G C A C G T A C T G A G C T A G C T A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:8
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CAGCTATTTG----
--GCTATTTTTAGC
 A T G C C T G A C T A G A G T C G A C T G C T A A G C T C G A T A G C T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

YY1/MA0095.2/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CAGCTATTTG-
GCNGCCATCTTG
 A C G T A T G C C T G A C T A G A G T C G A C T G C T A A G C T C G A T A G C T A C T G A C G T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

TFAP4/MA0691.1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CAGCTATTTG
ATCAGCTGTT--
 A C G T A C G T A T G C C T G A C T A G A G T C G A C T G C T A A G C T C G A T A G C T A C T G
T C G A G C A T A T G C C G T A A T C G T A G C A C G T A C T G C G A T A C G T A C G T A C G T