Information for 2-GAACAACACA (Motif 7)

C T A G C G T A G C T A A G T C C T G A C G T A A G T C G T C A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C T G A C G T A G C T A C T G C A G T A C G T A G T C
p-value:1e-10
log p-value:-2.475e+01
Information Content per bp:1.880
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif4.65%
Number of Background Sequences with motif47.6
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets60.6 +/- 26.9bp
Average Position of motif in Background45.5 +/- 35.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0122.1_Foxk1_2/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GAACAACACA-
CAAACAACAACACCT
 A C G T A C G T A C G T A C G T C T A G C G T A G C T A A G T C C T G A C G T A A G T C G T C A A G T C C G T A A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

PB0121.1_Foxj3_2/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GAACAACACA-----
AACACCAAAACAAAGGA
 A C G T A C G T C T A G C G T A G C T A A G T C C T G A C G T A A G T C G T C A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0173.1_Sox21_2/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GAACAACACA--
NNNNNGAACAATTGANN
 A C G T A C G T A C G T A C G T A C G T C T A G C G T A G C T A A G T C C T G A C G T A A G T C G T C A A G T C C G T A A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GAACAACACA---
TNNAGAACAATANATNN
 A C G T A C G T A C G T A C G T C T A G C G T A G C T A A G T C C T G A C G T A A G T C G T C A A G T C C G T A A C G T A C G T A C G T
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

PB0119.1_Foxa2_2/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GAACAACACA---
AAAAATAACAAACGG
 A C G T A C G T C T A G C G T A G C T A A G T C C T G A C G T A A G T C G T C A A G T C C G T A A C G T A C G T A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PB0072.1_Sox5_1/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GAACAACACA--
TTTAGAACAATAAAAT
 A C G T A C G T A C G T A C G T C T A G C G T A G C T A A G T C C T G A C G T A A G T C G T C A A G T C C G T A A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0123.1_Foxl1_2/Jaspar

Match Rank:7
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------GAACAACACA
ATATCAAAACAAAACA
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A G C T A A G T C C T G A C G T A A G T C G T C A A G T C C G T A
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GAACAACACA---
-NWAACCACADNN
 C T A G C G T A G C T A A G T C C T G A C G T A A G T C G T C A A G T C C G T A A C G T A C G T A C G T
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

PB0065.1_Sox15_1/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GAACAACACA---
TAGTGAACAATAGATTT
 A C G T A C G T A C G T A C G T C T A G C G T A G C T A A G T C C T G A C G T A A G T C G T C A A G T C C G T A A C G T A C G T A C G T
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GAACAACACA--
GGACCACCCACG
 C T A G C G T A G C T A A G T C C T G A C G T A A G T C G T C A A G T C C G T A A C G T A C G T
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G