Information for 4-AAACAACTAATATACA (Motif 4)

G C T A C G T A C G T A A G T C G T C A C G T A A G T C A C G T C G T A C T G A A C G T C G T A C G A T C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T C G T A A C G T C G T A A G C T A C G T C G T A C T A G A C G T A C G T C T A G A C G T A C G T C G A T
p-value:1e-11
log p-value:-2.553e+01
Information Content per bp:1.952
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif2.33%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.3 +/- 20.4bp
Average Position of motif in Background64.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)2.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0066.1_Sox17_1/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AAACAACTAATATACA
ATAAACAATTAAACA---
 A C G T A C G T G C T A C G T A C G T A A G T C G T C A C G T A A G T C A C G T C G T A C T G A A C G T C G T A C G A T C G T A A G T C C G T A
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A A C G T A C G T A C G T

PH0006.1_Barhl2/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AAACAACTAATATACA
AAAAACCAATTAAGAA---
 A C G T A C G T A C G T G C T A C G T A C G T A A G T C G T C A C G T A A G T C A C G T C G T A C T G A A C G T C G T A C G A T C G T A A G T C C G T A
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A A C G T A C G T A C G T

PH0172.1_Tlx2/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAACAACTAATATACA
TAATTAATTAATAACTA
 A C G T G C T A C G T A C G T A A G T C G T C A C G T A A G T C A C G T C G T A C T G A A C G T C G T A C G A T C G T A A G T C C G T A
A C G T G C T A C T G A C G A T G A C T C G T A C G T A G A C T G A C T C T G A C G T A G C A T C G T A C T G A G A T C C G A T C G A T

PH0018.1_Dbx1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AAACAACTAATATACA
TAATTAATTAATAATTA
 A C G T G C T A C G T A C G T A A G T C G T C A C G T A A G T C A C G T C G T A C T G A A C G T C G T A C G A T C G T A A G T C C G T A
G A C T G C T A C T G A G C A T G C A T G C T A C G T A G C A T G C A T C G T A G C T A G C A T C G T A T C G A C G A T C G A T C T G A

PH0108.1_Msx3/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AAACAACTAATATACA
CAAAACCAATTAATTT---
 A C G T A C G T A C G T G C T A C G T A C G T A A G T C G T C A C G T A A G T C A C G T C G T A C T G A A C G T C G T A C G A T C G T A A G T C C G T A
T G A C T C G A G T C A C T G A T C G A A T G C A G T C C T G A G T C A C G A T G A C T C G T A C T G A A C G T G A C T G C A T A C G T A C G T A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----AAACAACTAATATACA
TNNAGAACAATANATNN---
 A C G T A C G T A C G T A C G T G C T A C G T A C G T A A G T C G T C A C G T A A G T C A C G T C G T A C T G A A C G T C G T A C G A T C G T A A G T C C G T A
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C A C G T A C G T A C G T

PH0005.1_Barhl1/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AAACAACTAATATACA
AACAACCAATTAATTC---
 A C G T A C G T A C G T G C T A C G T A C G T A A G T C G T C A C G T A A G T C A C G T C G T A C T G A A C G T C G T A C G A T C G T A A G T C C G T A
G T C A C T G A G T A C T C G A C T G A A T G C G A T C C T G A G C T A A C G T G A C T C G T A C T G A A C G T C G A T G A T C A C G T A C G T A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----AAACAACTAATATACA
TAGTGAACAATAGATTT---
 A C G T A C G T A C G T A C G T G C T A C G T A C G T A A G T C G T C A C G T A A G T C A C G T C G T A C T G A A C G T C G T A C G A T C G T A A G T C C G T A
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T A C G T A C G T A C G T

PB0073.1_Sox7_1/Jaspar

Match Rank:9
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------AAACAACTAATATACA
AATAAAGAACAATAGAATTTCA
 A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G T A C G T A A G T C G T C A C G T A A G T C A C G T C G T A C T G A A C G T C G T A C G A T C G T A A G T C C G T A
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

Hmx3/MA0898.1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AAACAACTAATATACA
ACAAGCAATTAAAGAAT-
 A C G T A C G T G C T A C G T A C G T A A G T C G T C A C G T A A G T C A C G T C G T A C T G A A C G T C G T A C G A T C G T A A G T C C G T A
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T A C G T