Information for 12-TGKATRGCKC (Motif 23)

C A G T A C T G A C G T G T C A A C G T C T A G A C T G G T A C A C T G T A G C
Reverse Opposite:
A T C G G T A C C A T G A G T C A G T C T G C A C A G T T G C A A G T C G T C A
p-value:1e-4
log p-value:-1.079e+01
Information Content per bp:1.685
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif4.07%
Number of Background Sequences with motif215.7
Percentage of Background Sequences with motif0.47%
Average Position of motif in Targets49.6 +/- 27.2bp
Average Position of motif in Background47.9 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TGKATRGCKC--
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A C G T C A G T A C T G A C G T G T C A A C G T C T A G A C T G G T A C A C T G T A G C A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGKATRGCKC
CTGTCTGG---
 A C G T C A G T A C T G A C G T G T C A A C G T C T A G A C T G G T A C A C T G T A G C
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGKATRGCKC
TWGTCTGV---
 A C G T C A G T A C T G A C G T G T C A A C G T C T A G A C T G G T A C A C T G T A G C
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TGKATRGCKC
GTGGAT-----
 A C G T C A G T A C T G A C G T G T C A A C G T C T A G A C T G G T A C A C T G T A G C
A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TGKATRGCKC--
-TAATGGCGGNC
 C A G T A C T G A C G T G T C A A C G T C T A G A C T G G T A C A C T G T A G C A C G T A C G T
A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:TGKATRGCKC
-----NGCTN
 C A G T A C T G A C G T G T C A A C G T C T A G A C T G G T A C A C T G T A G C
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:TGKATRGCKC---
-----GGCGCGCT
 C A G T A C T G A C G T G T C A A C G T C T A G A C T G G T A C A C T G T A G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TGKATRGCKC
VBSYGTCTGG---
 A C G T A C G T A C G T C A G T A C T G A C G T G T C A A C G T C T A G A C T G G T A C A C T G T A G C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T

E2F1/MA0024.3/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TGKATRGCKC----
--TTTGGCGCCAAA
 C A G T A C T G A C G T G T C A A C G T C T A G A C T G G T A C A C T G T A G C A C G T A C G T A C G T A C G T
A C G T A C G T G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGKATRGCKC--
TGTCTGDCACCT
 C A G T A C T G A C G T G T C A A C G T C T A G A C T G G T A C A C T G T A G C A C G T A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T