Information for 14-GGCCGGNAGGCAG (Motif 20)

A C T G A C T G A G T C T G A C A C T G A T C G G A T C G T C A A C T G C T A G T G A C C G T A A C T G
Reverse Opposite:
A G T C G C A T A C T G A G T C G T A C A C G T C T A G T A G C G T A C A C T G A C T G A G T C A G T C
p-value:1e-5
log p-value:-1.347e+01
Information Content per bp:1.745
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif4.65%
Number of Background Sequences with motif205.6
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets43.1 +/- 17.4bp
Average Position of motif in Background46.6 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGCCGGNAGGCAG
CWGGCGGGAA-----
 A C G T A C G T A C T G A C T G A G T C T G A C A C T G A T C G G A T C G T C A A C T G C T A G T G A C C G T A A C T G
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGCCGGNAGGCAG
TGGCAGNCTGCCAG
 A C G T A C T G A C T G A G T C T G A C A C T G A T C G G A T C G T C A A C T G C T A G T G A C C G T A A C T G
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

E2F4/MA0470.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGCCGGNAGGCAG
GGGCGGGAAGG---
 A C G T A C T G A C T G A G T C T G A C A C T G A T C G G A T C G T C A A C T G C T A G T G A C C G T A A C T G
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T A C G T

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGCCGGNAGGCAG-----
GGAAGGAAGGAAGGAAGG
 A C T G A C T G A G T C T G A C A C T G A T C G G A T C G T C A A C T G C T A G T G A C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GGCCGGNAGGCAG
BTKGGCGGGAAA----
 A C G T A C G T A C G T A C T G A C T G A G T C T G A C A C T G A T C G G A T C G T C A A C T G C T A G T G A C C G T A A C T G
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------GGCCGGNAGGCAG
NAGANTGGCGGGGNGNA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C T G A C A C T G A T C G G A T C G T C A A C T G C T A G T G A C C G T A A C T G
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGCCGGNAGGCAG
GGGCGGGAAGG---
 A C G T A C T G A C T G A G T C T G A C A C T G A T C G G A T C G T C A A C T G C T A G T G A C C G T A A C T G
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGCCGGNAGGCAG
GGCGGGAARN---
 A C T G A C T G A G T C T G A C A C T G A T C G G A T C G T C A A C T G C T A G T G A C C G T A A C T G
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGCCGGNAGGCAG
TGGCGGGAAAHB--
 A C G T A C T G A C T G A G T C T G A C A C T G A T C G G A T C G T C A A C T G C T A G T G A C C G T A A C T G
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G A C G T A C G T

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGCCGGNAGGCAG
GGCGGGAAAH---
 A C T G A C T G A G T C T G A C A C T G A T C G G A T C G T C A A C T G C T A G T G A C C G T A A C T G
T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T A C G T A C G T A C G T