Information for 11-CYTWWGAAATWYY (Motif 18)

A G T C A G C T A C G T G C T A C G A T A C T G C G T A C G T A C G T A A G C T C G T A A G T C A G T C
Reverse Opposite:
C T A G C T A G C G A T C T G A A C G T A C G T A C G T A G T C C G T A C G A T C G T A C T G A A C T G
p-value:1e-6
log p-value:-1.567e+01
Information Content per bp:1.823
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.91%
Number of Background Sequences with motif31.0
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets58.4 +/- 31.1bp
Average Position of motif in Background50.2 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CYTWWGAAATWYY
CCTTTGATGT---
 A G T C A G C T A C G T G C T A C G A T A C T G C G T A C G T A C G T A A G C T C G T A A G T C A G T C
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CYTWWGAAATWYY
CCTTTGAWGT---
 A G T C A G C T A C G T G C T A C G A T A C T G C G T A C G T A C G T A A G C T C G T A A G T C A G T C
A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T A C G T A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CYTWWGAAATWYY
NATTGTGCAAT---
 A C G T A G T C A G C T A C G T G C T A C G A T A C T G C G T A C G T A C G T A A G C T C G T A A G T C A G T C
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T A C G T A C G T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CYTWWGAAATWYY
-TTATGCAAT---
 A G T C A G C T A C G T G C T A C G A T A C T G C G T A C G T A C G T A A G C T C G T A A G T C A G T C
A C G T C G A T C A G T C T G A A G C T C T A G G A T C T G C A C T G A A G C T A C G T A C G T A C G T

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CYTWWGAAATWYY
TTCTNNAGAANT---
 A C G T A C G T A G T C A G C T A C G T G C T A C G A T A C T G C G T A C G T A C G T A A G C T C G T A A G T C A G T C
A C G T A C G T A G T C G A C T A G C T C T G A C T G A C T A G C G T A C G T A T C G A G A C T A C G T A C G T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CYTWWGAAATWYY
AAATAAGAAAAAAC
 A C G T A G T C A G C T A C G T G C T A C G A T A C T G C G T A C G T A C G T A A G C T C G T A A G T C A G T C
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

Stat6/MA0520.1/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CYTWWGAAATWYY
CATTTCCTGAGAAAT---
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T A C G T G C T A C G A T A C T G C G T A C G T A C G T A A G C T C G T A A G T C A G T C
A T G C C G T A A G C T A C G T C G A T G T A C G A T C C G A T T A C G C T G A C A T G C G T A C T G A T G C A G A C T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CYTWWGAAATWYY
--TTTGAAACCG-
 A G T C A G C T A C G T G C T A C G A T A C T G C G T A C G T A C G T A A G C T C G T A A G T C A G T C
A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:9
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CYTWWGAAATWYY-
----GGAAATTCCC
 A G T C A G C T A C G T G C T A C G A T A C T G C G T A C G T A C G T A A G C T C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

PB0115.1_Ehf_2/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CYTWWGAAATWYY-
AAGATCGGAANTNNNA
 A C G T A C G T A G T C A G C T A C G T G C T A C G A T A C T G C G T A C G T A C G T A A G C T C G T A A G T C A G T C A C G T
C G T A G C T A A T C G C G T A C G A T T G A C C A T G C T A G C G T A C G T A T G C A G A C T G T C A A G T C G C A T G C T A