Information for 8-CTGABCTGACTAG (Motif 14)

A T G C C G A T A T C G T C G A A G C T A T G C G A C T A T C G G C T A A T G C C G A T G C T A A C T G
Reverse Opposite:
T G A C C G A T C G T A A T C G C A G T T A G C C T G A A T C G T C G A A G C T A T G C C G T A A T C G
p-value:1e-8
log p-value:-1.928e+01
Information Content per bp:1.644
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif7.56%
Number of Background Sequences with motif389.4
Percentage of Background Sequences with motif0.85%
Average Position of motif in Targets52.2 +/- 22.9bp
Average Position of motif in Background49.6 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.31
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTGABCTGACTAG
-TGACCTYA----
 A T G C C G A T A T C G T C G A A G C T A T G C G A C T A T C G G C T A A T G C C G A T G C T A A C T G
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTGABCTGACTAG
ATGGGGTGAT---
 A T G C C G A T A T C G T C G A A G C T A T G C G A C T A T C G G C T A A T G C C G A T G C T A A C T G
T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTGABCTGACTAG
GTGACCTT-----
 A T G C C G A T A T C G T C G A A G C T A T G C G A C T A T C G G C T A A T G C C G A T G C T A A C T G
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTGABCTGACTAG
-TGACCT------
 A T G C C G A T A T C G T C G A A G C T A T G C G A C T A T C G G C T A A T G C C G A T G C T A A C T G
A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTGABCTGACTAG
GTGGCGTGACNG-
 A T G C C G A T A T C G T C G A A G C T A T G C G A C T A T C G G C T A A T G C C G A T G C T A A C T G
T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTGABCTGACTAG
GTGGGGTGAT---
 A T G C C G A T A T C G T C G A A G C T A T G C G A C T A T C G G C T A A T G C C G A T G C T A A C T G
T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CTGABCTGACTAG
NNNANTGA---------
 A C G T A C G T A C G T A C G T A T G C C G A T A T C G T C G A A G C T A T G C G A C T A T C G G C T A A T G C C G A T G C T A A C T G
T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CRE(bZIP)/Promoter/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CTGABCTGACTAG
CGGTGACGTCAC---
 A C G T A C G T A T G C C G A T A T C G T C G A A G C T A T G C G A C T A T C G G C T A A T G C C G A T G C T A A C T G
A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C A C G T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CTGABCTGACTAG
NNNNTGACCCGGCGCG
 A C G T A C G T A C G T A T G C C G A T A T C G T C G A A G C T A T G C G A C T A T C G G C T A A T G C C G A T G C T A A C T G
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTGABCTGACTAG
ATGGGGTGAT---
 A T G C C G A T A T C G T C G A A G C T A T G C G A C T A T C G G C T A A T G C C G A T G C T A A C T G
T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T A C G T A C G T A C G T