Information for 1-CGGATCCCTCCGC (Motif 1)

A T G C A C T G C A T G G T C A C G A T A G T C A G T C A G T C A G C T A G T C A T G C A C T G A G T C
Reverse Opposite:
A C T G A G T C A T C G A C T G C T G A C T A G A C T G A C T G C G T A A C G T G T A C A G T C A T C G
p-value:1e-17
log p-value:-4.014e+01
Information Content per bp:1.841
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif3.49%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.6 +/- 31.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLIS2/MA0736.1/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CGGATCCCTCCGC----
---GACCCCCCGCGAAG
A T G C A C T G C A T G G T C A C G A T A G T C A G T C A G T C A G C T A G T C A T G C A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G T C G A A G T C G T A C G A T C G T A C G T A C G A T C C T A G A G T C C T A G C T G A G T C A A T C G

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CGGATCCCTCCGC
GGGGATTCCCCC--
A C G T A T G C A C T G C A T G G T C A C G A T A G T C A G T C A G T C A G C T A G T C A T G C A C T G A G T C
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C A C G T A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:3
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CGGATCCCTCCGC
NNNNGGTACCCCCCANN
A C G T A C G T A C G T A C G T A T G C A C T G C A T G G T C A C G A T A G T C A G T C A G T C A G C T A G T C A T G C A C T G A G T C
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

PB0204.1_Zfp740_2/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CGGATCCCTCCGC----
AAATTCCCCCCGGAAGT
A T G C A C T G C A T G G T C A C G A T A G T C A G T C A G T C A G C T A G T C A T G C A C T G A G T C A C G T A C G T A C G T A C G T
C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CGGATCCCTCCGC-
--KGCCCTTCCCCA
A T G C A C T G C A T G G T C A C G A T A G T C A G T C A G T C A G C T A G T C A T G C A C T G A G T C A C G T
A C G T A C G T C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A

ZIC3/MA0697.1/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CGGATCCCTCCGC-----
---GACCCCCCGCTGCGC
A T G C A C T G C A T G G T C A C G A T A G T C A G T C A G T C A G C T A G T C A T G C A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CGGATCCCTCCGC
-----CCCCCCCC
A T G C A C T G C A T G G T C A C G A T A G T C A G T C A G T C A G C T A G T C A T G C A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A T G C A G T C A G T C G A T C A G T C A G T C

ZIC1/MA0696.1/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CGGATCCCTCCGC----
---GACCCCCCGCTGTG
A T G C A C T G C A T G G T C A C G A T A G T C A G T C A G T C A G C T A G T C A T G C A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

ZIC4/MA0751.1/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CGGATCCCTCCGC-----
---GACCCCCCGCTGTGC
A T G C A C T G C A T G G T C A C G A T A G T C A G T C A G T C A G C T A G T C A T G C A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

NFKB2/MA0778.1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CGGATCCCTCCGC
AGGGGATTCCCCT--
A C G T A C G T A T G C A C T G C A T G G T C A C G A T A G T C A G T C A G T C A G C T A G T C A T G C A C T G A G T C
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T A C G T A C G T