Information for 13-TGGCGCTGGGGTA (Motif 23)

A G C T A C T G A T C G G T A C A C T G A G T C A C G T A C T G A T C G A C T G C T A G G A C T G T C A
Reverse Opposite:
A C G T C G T A G A T C G T A C A T G C A G T C C G T A C T A G T A G C A C T G A T G C A G T C C T G A
p-value:1e-5
log p-value:-1.329e+01
Information Content per bp:1.740
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.20%
Number of Background Sequences with motif36.4
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets42.7 +/- 25.1bp
Average Position of motif in Background51.4 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TGGCGCTGGGGTA
-TCCCCTGGGGAC
 A G C T A C T G A T C G G T A C A C T G A G T C A C G T A C T G A T C G A C T G C T A G G A C T G T C A
A C G T A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

NHLH1/MA0048.2/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGGCGCTGGGGTA
CGCAGCTGCG---
 A G C T A C T G A T C G G T A C A C T G A G T C A C G T A C T G A T C G A C T G C T A G G A C T G T C A
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGGCGCTGGGGTA
TGCCCNGGGGCA-
 A G C T A C T G A T C G G T A C A C T G A G T C A C G T A C T G A T C G A C T G C T A G G A C T G T C A
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGGCGCTGGGGTA
TGCCCTGAGGGCA
 A G C T A C T G A T C G G T A C A C T G A G T C A C G T A C T G A T C G A C T G C T A G G A C T G T C A
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGGCGCTGGGGTA
TGCCCTGAGGGCA
 A G C T A C T G A T C G G T A C A C T G A G T C A C G T A C T G A T C G A C T G C T A G G A C T G T C A
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGGCGCTGGGGTA
TGCCCTNAGGGCA
 A G C T A C T G A T C G G T A C A C T G A G T C A C G T A C T G A T C G A C T G C T A G G A C T G T C A
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TGGCGCTGGGGTA
----GCTGTG---
 A G C T A C T G A T C G G T A C A C T G A G T C A C G T A C T G A T C G A C T G C T A G G A C T G T C A
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGGCGCTGGGGTA
TGCCCTNGGGCA-
 A G C T A C T G A T C G G T A C A C T G A G T C A C G T A C T G A T C G A C T G C T A G G A C T G T C A
G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGGCGCTGGGGTA
TGCCCTNGGGCA-
 A G C T A C T G A T C G G T A C A C T G A G T C A C G T A C T G A T C G A C T G C T A G G A C T G T C A
G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGGCGCTGGGGTA
TGACCTTGAN---
 A G C T A C T G A T C G G T A C A C T G A G T C A C G T A C T G A T C G A C T G C T A G G A C T G T C A
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T