Information for 2-ATKGACTCTGAKM (Motif 2)

C G T A A C G T A C G T A C T G C G T A A G T C A C G T A G T C A C G T A C T G C G T A C A G T G T C A
Reverse Opposite:
A C G T G T A C A C G T A G T C C G T A A C T G C G T A A C T G A C G T G T A C G T A C C G T A A C G T
p-value:1e-13
log p-value:-3.105e+01
Information Content per bp:1.890
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.20%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.2 +/- 26.6bp
Average Position of motif in Background55.8 +/- 13.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ATKGACTCTGAKM----
-TGGACTTTGNNCTNTG
 C G T A A C G T A C G T A C T G C G T A A G T C A C G T A G T C A C G T A C T G C G T A C A G T G T C A A C G T A C G T A C G T A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

Hnf4a/MA0114.3/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ATKGACTCTGAKM--
ATTGGACTTTGACCCC
 A C G T C G T A A C G T A C G T A C T G C G T A A G T C A C G T A G T C A C G T A C T G C G T A C A G T G T C A A C G T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

PB0134.1_Hnf4a_2/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ATKGACTCTGAKM
NNATTGGACTTTNGNN
 A C G T A C G T A C G T C G T A A C G T A C G T A C T G C G T A A G T C A C G T A G T C A C G T A C T G C G T A C A G T G T C A
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ATKGACTCTGAKM---
-TGGACTTTGNNCTCN
 C G T A A C G T A C G T A C T G C G T A A G T C A C G T A G T C A C G T A C T G C G T A C A G T G T C A A C G T A C G T A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

Nr2e1/MA0676.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ATKGACTCTGAKM
-TTGACTTTT---
 C G T A A C G T A C G T A C T G C G T A A G T C A C G T A G T C A C G T A C T G C G T A C A G T G T C A
A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ATKGACTCTGAKM
NATGACCTTGA--
 C G T A A C G T A C G T A C T G C G T A A G T C A C G T A G T C A C G T A C T G C G T A C A G T G T C A
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:ATKGACTCTGAKM--
-TGACCTTTGACCTC
 C G T A A C G T A C G T A C T G C G T A A G T C A C G T A G T C A C G T A C T G C G T A C A G T G T C A A C G T A C G T
A C G T G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C

FOS::JUN/MA0099.2/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:ATKGACTCTGAKM
--TGACTCA----
 C G T A A C G T A C G T A C T G C G T A A G T C A C G T A G T C A C G T A C T G C G T A C A G T G T C A
A C G T A C G T A G C T A C T G G T C A T G A C C G A T A T G C C G T A A C G T A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:ATKGACTCTGAKM---
-TGACCTCTGACCCCN
 C G T A A C G T A C G T A C T G C G T A A G T C A C G T A G T C A C G T A C T G C G T A C A G T G T C A A C G T A C G T A C G T
A C G T G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:ATKGACTCTGAKM----
ATTTCCTTTGATCTATA
 C G T A A C G T A C G T A C T G C G T A A G T C A C G T A G T C A C G T A C T G C G T A C A G T G T C A A C G T A C G T A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A