Information for 23-TTGGCTCACACTG (Motif 51)

A C G T A C G T A C T G A C T G A G T C A C G T A G T C G T C A G T A C C G T A A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G A C G T C A T G A C G T A C T G C G T A A C T G A G T C A G T C G T C A C G T A
p-value:1e-7
log p-value:-1.698e+01
Information Content per bp:1.938
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets29.0 +/- 3.0bp
Average Position of motif in Background69.0 +/- 4.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCTCACACTG
NTTGGCANN-----
 A C G T A C G T A C G T A C T G A C T G A G T C A C G T A G T C G T C A G T A C C G T A A G T C A C G T A C T G
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TTGGCTCACACTG
TTGGCA-------
 A C G T A C G T A C T G A C T G A G T C A C G T A G T C G T C A G T A C C G T A A G T C A C G T A C T G
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTGGCTCACACTG--
AGCGGCACACACGCAA
 A C G T A C G T A C G T A C T G A C T G A G T C A C G T A G T C G T C A G T A C C G T A A G T C A C G T A C T G A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TTGGCTCACACTG
-TGTCTGDCACCT
 A C G T A C G T A C T G A C T G A G T C A C G T A G T C G T C A G T A C C G T A A G T C A C G T A C T G
A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

RHOXF1/MA0719.1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TTGGCTCACACTG
-NGGATTAN----
 A C G T A C G T A C T G A C T G A G T C A C G T A G T C G T C A G T A C C G T A A G T C A C G T A C T G
A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:6
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TTGGCTCACACTG
-----TCACACCT
 A C G T A C G T A C T G A C T G A G T C A C G T A G T C G T C A G T A C C G T A A G T C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T

TBX1/MA0805.1/Jaspar

Match Rank:7
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TTGGCTCACACTG
-----TCACACCT
 A C G T A C G T A C T G A C T G A G T C A C G T A G T C G T C A G T A C C G T A A G T C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TTGGCTCACACTG
CTGTCTGTCACCT
 A C G T A C G T A C T G A C T G A G T C A C G T A G T C G T C A G T A C C G T A A G T C A C G T A C T G
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

FOS::JUN/MA0099.2/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TTGGCTCACACTG
-TGACTCA-----
 A C G T A C G T A C T G A C T G A G T C A C G T A G T C G T C A G T A C C G T A A G T C A C G T A C T G
A C G T A G C T A C T G G T C A T G A C C G A T A T G C C G T A A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCTCACACTG
NNTTGGCANN-----
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C G T A G T C G T C A G T A C C G T A A G T C A C G T A C T G
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T A C G T