Information for 21-TGCTGWGGWSMCT (Motif 49)

A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G C G A T A T G C G T A C A G T C G A C T
Reverse Opposite:
C G T A A C T G A C T G A T C G C G T A A G T C G T A C C G A T A G T C C G T A C T A G A G T C C G T A
p-value:1e-7
log p-value:-1.749e+01
Information Content per bp:1.869
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.1 +/- 32.3bp
Average Position of motif in Background67.9 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TGCTGWGGWSMCT
CCCCCTGCTGTG------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G C G A T A T G C G T A C A G T C G A C T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGCTGWGGWSMCT
-GCTGTGGTTT--
 A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G C G A T A T G C G T A C A G T C G A C T
A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TGCTGWGGWSMCT
NNTCCTGCTGTGNNN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G C G A T A T G C G T A C A G T C G A C T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TGCTGWGGWSMCT
AATTTGCTGAC------
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G C G A T A T G C G T A C A G T C G A C T
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TGCTGWGGWSMCT
TNTCCTGCTGTGNNG---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G C G A T A T G C G T A C A G T C G A C T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGCTGWGGWSMCT
-GCTGTG------
 A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G C G A T A T G C G T A C A G T C G A C T
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TGCTGWGGWSMCT
TCNCCTGCTGNGNNN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G C G A T A T G C G T A C A G T C G A C T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGCTGWGGWSMCT
CCTGCTGAGH-----
 A C G T A C G T A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G C G A T A T G C G T A C A G T C G A C T
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TGCTGWGGWSMCT
AAAATGCTGACT-----
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G C G A T A T G C G T A C A G T C G A C T
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T A C G T A C G T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TGCTGWGGWSMCT
AAAWWTGCTGACWWD---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G C G A T A T G C G T A C A G T C G A C T
C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G A C G T A C G T A C G T