Information for 20-AWGGCTGCCTCCCRCT (Motif 35)

G C T A C G A T A C T G A C T G A G T C C G A T A C T G A G T C A G T C C G A T A G T C A T G C A G T C C T G A A G T C A G C T
Reverse Opposite:
C T G A A C T G A G C T T A C G A T C G A C T G C G T A A C T G C T A G G T A C C G T A A C T G A G T C A G T C C G T A C A G T
p-value:1e-8
log p-value:-2.002e+01
Information Content per bp:1.782
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.6 +/- 20.1bp
Average Position of motif in Background31.5 +/- 18.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AWGGCTGCCTCCCRCT
CTGGCAGNCTGCCA--
 G C T A C G A T A C T G A C T G A G T C C G A T A C T G A G T C A G T C C G A T A G T C A T G C A G T C C T G A A G T C A G C T
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AWGGCTGCCTCCCRCT
CTGTCTGTCACCT---
 G C T A C G A T A C T G A C T G A G T C C G A T A C T G A G T C A G T C C G A T A G T C A T G C A G T C C T G A A G T C A G C T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AWGGCTGCCTCCCRCT
-TGTCTGDCACCT---
 G C T A C G A T A C T G A C T G A G T C C G A T A C T G A G T C A G T C C G A T A G T C A T G C A G T C C T G A A G T C A G C T
A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:4
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:AWGGCTGCCTCCCRCT-
------NCTTCCCGCCC
 G C T A C G A T A C T G A C T G A G T C C G A T A C T G A G T C A G T C C G A T A G T C A T G C A G T C C T G A A G T C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:AWGGCTGCCTCCCRCT
------NYTTCCCGCC
 G C T A C G A T A C T G A C T G A G T C C G A T A C T G A G T C A G T C C G A T A G T C A T G C A G T C C T G A A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AWGGCTGCCTCCCRCT
TWGTCTGV--------
 G C T A C G A T A C T G A C T G A G T C C G A T A C T G A G T C A G T C C G A T A G T C A T G C A G T C C T G A A G T C A G C T
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.52
Offset:-8
Orientation:forward strand
Alignment:--------AWGGCTGCCTCCCRCT-
MACCTTCYATGGCTCCCTAKTGCCY
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G A T A C T G A C T G A G T C C G A T A C T G A G T C A G T C C G A T A G T C A T G C A G T C C T G A A G T C A G C T A C G T
T G C A T G C A A G T C A G T C G A C T C A G T A T G C G A T C C T G A A C G T C T A G C T A G A G T C A C G T A G T C A G T C A G T C G A C T C G T A A C G T A G C T C T A G G A T C G A T C G A T C

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AWGGCTGCCTCCCRCT
--NGCTN---------
 G C T A C G A T A C T G A C T G A G T C C G A T A C T G A G T C A G T C C G A T A G T C A T G C A G T C C T G A A G T C A G C T
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:9
Score:0.52
Offset:4
Orientation:forward strand
Alignment:AWGGCTGCCTCCCRCT--
----CCCCCGCCCCCGCC
 G C T A C G A T A C T G A C T G A G T C C G A T A C T G A G T C A G T C C G A T A G T C A T G C A G T C C T G A A G T C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:10
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:AWGGCTGCCTCCCRCT--
------YCCGCCCACGCN
 G C T A C G A T A C T G A C T G A G T C C G A T A C T G A G T C A G T C C G A T A G T C A T G C A G T C C T G A A G T C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A