p-value: | 1e-9 |
log p-value: | -2.160e+01 |
Information Content per bp: | 1.865 |
Number of Target Sequences with motif | 11.0 |
Percentage of Target Sequences with motif | 1.42% |
Number of Background Sequences with motif | 46.3 |
Percentage of Background Sequences with motif | 0.10% |
Average Position of motif in Targets | 66.6 +/- 21.5bp |
Average Position of motif in Background | 49.9 +/- 27.8bp |
Strand Bias (log2 ratio + to - strand density) | -0.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer
Match Rank: | 1 |
Score: | 0.66 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GGCATTACTC- RGCCATYAATCA |
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Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer
Match Rank: | 2 |
Score: | 0.65 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GGCATTACTC NGGGATTA--- |
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Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer
Match Rank: | 3 |
Score: | 0.63 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GGCATTACTC- -TCATCAATCA |
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PH0130.1_Otx2/Jaspar
Match Rank: | 4 |
Score: | 0.63 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GGCATTACTC--- TGTAGGGATTAATTGTC |
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HIC2/MA0738.1/Jaspar
Match Rank: | 5 |
Score: | 0.63 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GGCATTACTC NGTGGGCAT----- |
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PH0138.1_Pitx2/Jaspar
Match Rank: | 6 |
Score: | 0.62 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GGCATTACTC--- TGAAGGGATTAATCATC |
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Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer
Match Rank: | 7 |
Score: | 0.62 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GGCATTACTC -YCATTAMC- |
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TEAD3/MA0808.1/Jaspar
Match Rank: | 8 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GGCATTACTC -ACATTCCA- |
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Hic1/MA0739.1/Jaspar
Match Rank: | 9 |
Score: | 0.60 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GGCATTACTC GGTTGGCAT----- |
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PITX3/MA0714.1/Jaspar
Match Rank: | 10 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GGCATTACTC GGGATTANN- |
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