Information for 15-GGAGTGACAGAGACTA (Motif 26)

A C T G C T A G C G T A A T C G A G C T A C T G C T G A G T A C C G T A A C T G C G T A A T C G C G T A A T G C C G A T C G T A
Reverse Opposite:
C G A T C G T A A T C G A C G T A T G C A C G T A G T C A C G T A C T G A G C T A G T C C T G A A T G C A C G T A G T C A G T C
p-value:1e-9
log p-value:-2.203e+01
Information Content per bp:1.908
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.6 +/- 16.4bp
Average Position of motif in Background32.8 +/- 20.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGAGTGACAGAGACTA
NTGATTGACAGN-----
 A C G T A C T G C T A G C G T A A T C G A G C T A C T G C T G A G T A C C G T A A C T G C G T A A T C G C G T A A T G C C G A T C G T A
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGAGTGACAGAGACTA
-AGGTGHCAGACA---
 A C T G C T A G C G T A A T C G A G C T A C T G C T G A G T A C C G T A A C T G C G T A A T C G C G T A A T G C C G A T C G T A
A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGAGTGACAGAGACTA
BTGABTGACAGS-----
 A C G T A C T G C T A G C G T A A T C G A G C T A C T G C T G A G T A C C G T A A C T G C G T A A T C G C G T A A T G C C G A T C G T A
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGAGTGACAGAGACTA
TGAGTGACAGSC----
 A C T G C T A G C G T A A T C G A G C T A C T G C T G A G T A C C G T A A C T G C G T A A T C G C G T A A T G C C G A T C G T A
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGAGTGACAGAGACTA
-AGGTGNCAGACAG--
 A C T G C T A G C G T A A T C G A G C T A C T G C T G A G T A C C G T A A C T G C G T A A T C G C G T A A T G C C G A T C G T A
A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGAGTGACAGAGACTA
NNATTGACAGGTGCTT
 A C T G C T A G C G T A A T C G A G C T A C T G C T G A G T A C C G T A A C T G C G T A A T C G C G T A A T G C C G A T C G T A
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GGAGTGACAGAGACTA
--VBTGWCAGCB----
 A C T G C T A G C G T A A T C G A G C T A C T G C T G A G T A C C G T A A C T G C G T A A T C G C G T A A T G C C G A T C G T A
A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GGAGTGACAGAGACTA--
---NNNACCGAGAGTNNN
 A C T G C T A G C G T A A T C G A G C T A C T G C T G A G T A C C G T A A C T G C G T A A T C G C G T A A T G C C G A T C G T A A C G T A C G T
A C G T A C G T A C G T A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

PH0105.1_Meis3/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGAGTGACAGAGACTA
GTATTGACAGGTNNTT
 A C T G C T A G C G T A A T C G A G C T A C T G C T G A G T A C C G T A A C T G C G T A A T C G C G T A A T G C C G A T C G T A
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

MEIS3/MA0775.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GGAGTGACAGAGACTA
---TTGACAGG-----
 A C T G C T A G C G T A A T C G A G C T A C T G C T G A G T A C C G T A A C T G C G T A A T C G C G T A A T G C C G A T C G T A
A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T A C G T