Information for 3-GACTCTTGAT (Motif 21)

A C T G C G T A G T A C A C G T G T A C A C G T C G A T C A T G G T C A A G C T
Reverse Opposite:
C T G A A C G T G T A C G C T A C G T A C A T G C G T A A C T G C G A T A G T C
p-value:1e-11
log p-value:-2.544e+01
Information Content per bp:1.761
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.33%
Number of Background Sequences with motif129.7
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets56.5 +/- 20.9bp
Average Position of motif in Background49.5 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------GACTCTTGAT
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A G T A C A C G T G T A C A C G T C G A T C A T G G T C A A G C T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GACTCTTGAT
GAATATTCAT
 A C T G C G T A G T A C A C G T G T A C A C G T C G A T C A T G G T C A A G C T
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T

Nr2e1/MA0676.1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GACTCTTGAT
TTGACTTTT---
 A C G T A C G T A C T G C G T A G T A C A C G T G T A C A C G T C G A T C A T G G T C A A G C T
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GACTCTTGAT--
--NTATYGATCH
 A C T G C G T A G T A C A C G T G T A C A C G T C G A T C A T G G T C A A G C T A C G T A C G T
A C G T A C G T C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GACTCTTGAT
GHATATKCAT
 A C T G C G T A G T A C A C G T G T A C A C G T C G A T C A T G G T C A A G C T
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T

FOXL1/MA0033.2/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GACTCTTGAT
---TGTTTAC
 A C T G C G T A G T A C A C G T G T A C A C G T C G A T C A T G G T C A A G C T
A C G T A C G T A C G T C A G T C T A G A C G T C A G T A C G T C T G A G A T C

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:7
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GACTCTTGAT----
----ATTGATTYND
 A C T G C G T A G T A C A C G T G T A C A C G T C G A T C A T G G T C A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

MEF2D/MA0773.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GACTCTTGAT---
-TCTATTTATAGN
 A C T G C G T A G T A C A C G T G T A C A C G T C G A T C A T G G T C A A G C T A C G T A C G T A C G T
A C G T C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

Arid3a/MA0151.1/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GACTCTTGAT
----TTTAAT
 A C T G C G T A G T A C A C G T G T A C A C G T C G A T C A T G G T C A A G C T
A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GACTCTTGAT-----
-NTTATTGATTTTTT
 A C T G C G T A G T A C A C G T G T A C A C G T C G A T C A T G G T C A A G C T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T