Information for 3-TTTACAAGCAVAG (Motif 14)

A C G T G C A T A C G T C T G A G T A C C G T A G T C A T C A G G T A C G T C A T G A C C G T A A C T G
Reverse Opposite:
G T A C A C G T A C T G A C G T A C T G A G T C A C G T A C G T A C T G A G C T C G T A C G T A C G T A
p-value:1e-11
log p-value:-2.627e+01
Information Content per bp:1.767
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.68%
Number of Background Sequences with motif50.6
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets50.5 +/- 21.7bp
Average Position of motif in Background51.5 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTTACAAGCAVAG-
ATTTGCATACAATGG
 A C G T A C G T G C A T A C G T C T G A G T A C C G T A G T C A T C A G G T A C G T C A T G A C C G T A A C T G A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

HOXC13/MA0907.1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTTACAAGCAVAG
NTTTTACGAGN----
 A C G T A C G T A C G T G C A T A C G T C T G A G T A C C G T A G T C A T C A G G T A C G T C A T G A C C G T A A C T G
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T A C G T A C G T A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TTTACAAGCAVAG
ANATTTTACGAGNNNN-
 A C G T A C G T A C G T A C G T A C G T G C A T A C G T C T G A G T A C C G T A G T C A T C A G G T A C G T C A T G A C C G T A A C T G
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TTTACAAGCAVAG
NAATTTTACGAGNTNN-
 A C G T A C G T A C G T A C G T A C G T G C A T A C G T C T G A G T A C C G T A G T C A T C A G G T A C G T C A T G A C C G T A A C T G
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:5
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TTTACAAGCAVAG
ANATTTTTGCAANTN---
 A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T C T G A G T A C C G T A G T C A T C A G G T A C G T C A T G A C C G T A A C T G
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G A C G T A C G T A C G T

HOXC12/MA0906.1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TTTACAAGCAVAG
NTTTTACGACC----
 A C G T A C G T A C G T G C A T A C G T C T G A G T A C C G T A G T C A T C A G G T A C G T C A T G A C C G T A A C T G
C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C A C G T A C G T A C G T A C G T

PH0067.1_Hoxc12/Jaspar

Match Rank:7
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TTTACAAGCAVAG
GNNNTTTTACGACCTNA-
 A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T C T G A G T A C C G T A G T C A T C A G G T A C G T C A T G A C C G T A A C T G
C T A G G C T A T C G A C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C A G C T C G T A C T G A A C G T

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TTTACAAGCAVAG
TGTTTACH-------
 A C G T A C G T A C G T G C A T A C G T C T G A G T A C C G T A G T C A T C A G G T A C G T C A T G A C C G T A A C T G
A C G T A C T G A C G T A C G T A C G T C G T A A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TTTACAAGCAVAG-
GTATAAAAGGCGGGG
 A C G T A C G T G C A T A C G T C T G A G T A C C G T A G T C A T C A G G T A C G T C A T G A C C G T A A C T G A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TATA-Box(TBP)/Promoter/Homer

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TTTACAAGCAVAG
GNCTATAAAAGG----
 A C G T A C G T A C G T A C G T G C A T A C G T C T G A G T A C C G T A G T C A T C A G G T A C G T C A T G A C C G T A A C T G
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T A C G T A C G T A C G T