Information for 2-GGACGTGTCTMTA (Motif 11)

C T A G A C T G C T G A G T A C A T C G A C G T C T A G A C G T A G T C C G A T G T C A C G A T C T G A
Reverse Opposite:
A G C T C G T A A C G T C G T A T C A G C G T A A G T C G T C A A T G C A C T G A G C T G T A C A G T C
p-value:1e-11
log p-value:-2.683e+01
Information Content per bp:1.743
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.29%
Number of Background Sequences with motif20.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets57.1 +/- 32.2bp
Average Position of motif in Background59.6 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hes2/MA0616.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGACGTGTCTMTA
GCACGTGTCNNNN
 C T A G A C T G C T G A G T A C A T C G A C G T C T A G A C G T A G T C C G A T G T C A C G A T C T G A
A C T G A G T C C G T A A G T C A C T G A G C T A C T G A G C T A T G C A C T G C G A T C G A T C G T A

PH0104.1_Meis2/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGACGTGTCTMTA-
AAAGACCTGTCAATAC
 A C G T A C G T C T A G A C T G C T G A G T A C A T C G A C G T C T A G A C G T A G T C C G A T G T C A C G A T C T G A A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGACGTGTCTMTA
GGACGTGC-----
 C T A G A C T G C T G A G T A C A T C G A C G T C T A G A C G T A G T C C G A T G T C A C G A T C T G A
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGACGTGTCTMTA-
AAAGACCTGTCAATCC
 A C G T A C G T C T A G A C T G C T G A G T A C A T C G A C G T C T A G A C G T A G T C C G A T G T C A C G A T C T G A A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

XBP1/MA0844.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GGACGTGTCTMTA
GATGACGTGGCANT-
 A C G T A C G T C T A G A C T G C T G A G T A C A T C G A C G T C T A G A C G T A G T C C G A T G T C A C G A T C T G A
T C A G T G C A G A C T A C T G T C G A G A T C C T A G G A C T T C A G C A T G G T A C T G C A G A C T G C A T A C G T

PH0102.1_Meis1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGACGTGTCTMTA-
AACGAGCTGTCAATAC
 A C G T A C G T C T A G A C T G C T G A G T A C A T C G A C G T C T A G A C G T A G T C C G A T G T C A C G A T C T G A A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGACGTGTCTMTA
GGGTACGTGC-----
 A C G T A C G T C T A G A C T G C T G A G T A C A T C G A C G T C T A G A C G T A G T C C G A T G T C A C G A T C T G A
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGACGTGTCTMTA-
AAGCACCTGTCAATAT
 A C G T A C G T C T A G A C T G C T G A G T A C A T C G A C G T C T A G A C G T A G T C C G A T G T C A C G A T C T G A A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGACGTGTCTMTA
RTACGTGC-----
 C T A G A C T G C T G A G T A C A T C G A C G T C T A G A C G T A G T C C G A T G T C A C G A T C T G A
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T A C G T A C G T

PH0105.1_Meis3/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGACGTGTCTMTA-
AATTACCTGTCAATAC
 A C G T A C G T C T A G A C T G C T G A G T A C A T C G A C G T C T A G A C G T A G T C C G A T G T C A C G A T C T G A A C G T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C