Information for 3-TCCCGCAGAG (Motif 7)

A C G T T A G C T G A C T A G C T A C G A G T C T C G A C T A G G C T A T A C G
Reverse Opposite:
A T G C C G A T G A T C A G C T T C A G A T G C A T C G A C T G A C T G T G C A
p-value:1e-12
log p-value:-2.797e+01
Information Content per bp:1.651
Number of Target Sequences with motif99.0
Percentage of Target Sequences with motif11.77%
Number of Background Sequences with motif2541.6
Percentage of Background Sequences with motif5.41%
Average Position of motif in Targets53.4 +/- 26.0bp
Average Position of motif in Background51.2 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---TCCCGCAGAG
NYTTCCCGCC---
 A C G T A C G T A C G T A C G T T A G C T G A C T A G C T A C G A G T C T C G A C T A G G C T A T A C G
T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C A C G T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:2
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TCCCGCAGAG
TTTCCCGCCMAV
 A C G T A C G T A C G T T A G C T G A C T A G C T A C G A G T C T C G A C T A G G C T A T A C G
C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C

E2F4/MA0470.1/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TCCCGCAGAG
NNTTCCCGCCC--
 A C G T A C G T A C G T A C G T T A G C T G A C T A G C T A C G A G T C T C G A C T A G G C T A T A C G
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TCCCGCAGAG-
-CCTGCTGAGH
 A C G T T A G C T G A C T A G C T A C G A G T C T C G A C T A G G C T A T A C G A C G T
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

GCM2/MA0767.1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TCCCGCAGAG
TACCCGCATN-
 A C G T A C G T T A G C T G A C T A G C T A C G A G T C T C G A C T A G G C T A T A C G
G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TCCCGCAGAG-
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T A C G T A C G T T A G C T G A C T A G C T A C G A G T C T C G A C T A G G C T A T A C G A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TCCCGCAGAG
DTTTCCCGCC---
 A C G T A C G T A C G T A C G T T A G C T G A C T A G C T A C G A G T C T C G A C T A G G C T A T A C G
C T G A G C A T G A C T C A G T A T G C A T G C A T G C A C T G A T G C A T G C A C G T A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:8
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TCCCGCAGAG
VDTTTCCCGCCA--
 A C G T A C G T A C G T A C G T A C G T T A G C T G A C T A G C T A C G A G T C T C G A C T A G G C T A T A C G
T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TCCCGCAGAG
NCTTCCCGCCC--
 A C G T A C G T A C G T A C G T T A G C T G A C T A G C T A C G A G T C T C G A C T A G G C T A T A C G
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TCCCGCAGAG
TTCCCGCCWG-
 A C G T A C G T T A G C T G A C T A G C T A C G A G T C T C G A C T A G G C T A T A C G
A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T