Information for 3-AACACAAAGTATT (Motif 9)

C G T A C G T A A G T C C G T A A G T C G T C A C G T A C G T A A C T G A C G T C T G A A C G T A C G T
Reverse Opposite:
C G T A C G T A G A C T C G T A A G T C A C G T A C G T A C G T A C T G A C G T A C T G G C A T A C G T
p-value:1e-11
log p-value:-2.647e+01
Information Content per bp:1.937
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.4 +/- 28.5bp
Average Position of motif in Background49.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---AACACAAAGTATT
AAACAGACAAAGGAAT
 A C G T A C G T A C G T C G T A C G T A A G T C C G T A A G T C G T C A C G T A C G T A A C T G A C G T C T G A A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:AACACAAAGTATT
---ACAAAG----
 C G T A C G T A A G T C C G T A A G T C G T C A C G T A C G T A A C T G A C G T C T G A A C G T A C G T
A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AACACAAAGTATT
AAAACAAAGG---
 C G T A C G T A A G T C C G T A A G T C G T C A C G T A C G T A A C T G A C G T C T G A A C G T A C G T
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AACACAAAGTATT-
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T C G T A C G T A A G T C C G T A A G T C G T C A C G T A C G T A A C T G A C G T C T G A A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0071.1_Sox4_1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AACACAAAGTATT-
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T C G T A C G T A A G T C C G T A A G T C G T C A C G T A C G T A A C T G A C G T C T G A A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AACACAAAGTATT--
---ACAAAGGNBCCT
 C G T A C G T A A G T C C G T A A G T C G T C A C G T A C G T A A C T G A C G T C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AACACAAAGTATT
VRRACAAWGG---
 C G T A C G T A A G T C C G T A A G T C G T C A C G T A C G T A A C T G A C G T C T G A A C G T A C G T
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AACACAAAGTATT
AAAACAATGG---
 C G T A C G T A A G T C C G T A A G T C G T C A C G T A C G T A A C T G A C G T C T G A A C G T A C G T
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AACACAAAGTATT
CTCACACAATGGCGC
 A C G T A C G T C G T A C G T A A G T C C G T A A G T C G T C A C G T A C G T A A C T G A C G T C T G A A C G T A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

Sox2/MA0143.3/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AACACAAAGTATT
--AACAAAGG---
 C G T A C G T A A G T C C G T A A G T C G T C A C G T A C G T A A C T G A C G T C T G A A C G T A C G T
A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T