Information for 4-GCACGCCTCC (Motif 34)

A C T G A G T C C G T A A G T C A C T G A G T C A G T C A C G T A T G C G T A C
Reverse Opposite:
A C T G A T C G C G T A A C T G A C T G A G T C A C T G A C G T A C T G A G T C
p-value:1e-7
log p-value:-1.615e+01
Information Content per bp:1.936
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.2 +/- 12.3bp
Average Position of motif in Background24.0 +/- 9.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0180.1_Sp4_2/Jaspar

Match Rank:1
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----GCACGCCTCC-
NNGGCCACGCCTTTN
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C T G A G T C A G T C A C G T A T G C G T A C A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GCACGCCTCC
AGCGCGCC---
 A C G T A C T G A G T C C G T A A G T C A C T G A G T C A G T C A C G T A T G C G T A C
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GCACGCCTCC
-CACGCA---
 A C T G A G T C C G T A A G T C A C T G A G T C A G T C A C G T A T G C G T A C
A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T

Hes1/MA1099.1/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GCACGCCTCC
GGCACGCGTC-
 A C G T A C T G A G T C C G T A A G T C A C T G A G T C A G T C A C G T A T G C G T A C
T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C A C G T

KLF16/MA0741.1/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCACGCCTCC
GCCACGCCCCC
 A C G T A C T G A G T C C G T A A G T C A C T G A G T C A G T C A C G T A T G C G T A C
T C A G G T A C G T A C T G C A G T A C C T A G G T A C T A G C G A T C G T A C G A T C

KLF14/MA0740.1/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GCACGCCTCC--
GGCCACGCCCCCTT
 A C G T A C G T A C T G A G T C C G T A A G T C A C T G A G T C A G T C A C G T A T G C G T A C A C G T A C G T
C A T G T C A G G T A C A G T C T G C A G A T C T C A G A T G C A G T C A G T C G T A C G A T C G A C T G A C T

SP3/MA0746.1/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GCACGCCTCC
GCCACGCCCCC
 A C G T A C T G A G T C C G T A A G T C A C T G A G T C A G T C A C G T A T G C G T A C
T A C G G T A C G T A C T G C A G A T C C T A G G T A C G T A C A G T C G T A C G A T C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:8
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GCACGCCTCC
TBGCACGCAA--
 A C G T A C G T A C T G A G T C C G T A A G T C A C T G A G T C A G T C A C G T A T G C G T A C
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:9
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCACGCCTCC
GCACGTNC--
 A C T G A G T C C G T A A G T C A C T G A G T C A G T C A C G T A T G C G T A C
A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:10
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCACGCCTCC
GCACGTAY--
 A C T G A G T C C G T A A G T C A C T G A G T C A G T C A C G T A T G C G T A C
C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T