Information for 3-GGGAAMCCAMACTRAA (Motif 3)

A C T G C A T G C A T G C G T A C G T A T G C A A G T C A G T C G C T A G T A C C G T A A G T C A C G T C T G A G T C A T G C A
Reverse Opposite:
A C G T A C G T A G C T C G T A A C T G A C G T A C T G C G A T T A C G C T A G A C G T A C G T A C G T G T A C G T A C G T A C
p-value:1e-16
log p-value:-3.888e+01
Information Content per bp:1.769
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.3 +/- 25.9bp
Average Position of motif in Background41.3 +/- 1.5bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GGGAAMCCAMACTRAA
GGAAANTGAAACTNA-
 A C T G C A T G C A T G C G T A C G T A T G C A A G T C A G T C G C T A G T A C C G T A A G T C A C G T C T G A G T C A T G C A
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A A C G T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GGGAAMCCAMACTRAA
CAAAATCGAAACTAA-
 A C T G C A T G C A T G C G T A C G T A T G C A A G T C A G T C G C T A G T A C C G T A A G T C A C G T C T G A G T C A T G C A
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGGAAMCCAMACTRAA
GAGAACCGAAACTG--
 A C T G C A T G C A T G C G T A C G T A T G C A A G T C A G T C G C T A G T A C C G T A A G T C A C G T C T G A G T C A T G C A
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G A C G T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GGGAAMCCAMACTRAA
-GAAAMTGAAACT---
 A C T G C A T G C A T G C G T A C G T A T G C A A G T C A G T C G C T A G T A C C G T A A G T C A C G T C T G A G T C A T G C A
A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T A C G T A C G T

PB0035.1_Irf5_1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGGAAMCCAMACTRAA
ATAAACCGAAACCAA-
 A C T G C A T G C A T G C G T A C G T A T G C A A G T C A G T C G C T A G T A C C G T A A G T C A C G T C T G A G T C A T G C A
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGGAAMCCAMACTRAA
-AGAAACGAAAGT---
 A C T G C A T G C A T G C G T A C G T A T G C A A G T C A G T C G C T A G T A C C G T A A G T C A C G T C T G A G T C A T G C A
A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T A C G T A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGGAAMCCAMACTRAA
-GRAASTGAAAST---
 A C T G C A T G C A T G C G T A C G T A T G C A A G T C A G T C G C T A G T A C C G T A A G T C A C G T C T G A G T C A T G C A
A C G T T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T A C G T A C G T A C G T

PB0034.1_Irf4_1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGGAAMCCAMACTRAA
-CGTATCGAAACCAAA
 A C T G C A T G C A T G C G T A C G T A T G C A A G T C A G T C G C T A G T A C C G T A A G T C A C G T C T G A G T C A T G C A
A C G T T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGGAAMCCAMACTRAA
-GGAAGTGAAAST---
 A C T G C A T G C A T G C G T A C G T A T G C A A G T C A G T C G C T A G T A C C G T A A G T C A C G T C T G A G T C A T G C A
A C G T C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T A C G T A C G T A C G T

PB0036.1_Irf6_1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGGAAMCCAMACTRAA--
-CTGATCGAAACCAAAGT
 A C T G C A T G C A T G C G T A C G T A T G C A A G T C A G T C G C T A G T A C C G T A A G T C A C G T C T G A G T C A T G C A A C G T A C G T
A C G T G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T