Information for 1-CCCTAAGRSTGCCWTT (Motif 1)

A G T C A G T C A G T C C G A T G T C A C G T A C A T G C T A G A T C G A C G T A T C G A G T C A G T C C G T A A G C T C G A T
Reverse Opposite:
C G T A C T G A C G A T C T A G C T A G A T G C C G T A A T G C G A T C G A T C C G A T A C G T C G T A A C T G A C T G C T A G
p-value:1e-16
log p-value:-3.888e+01
Information Content per bp:1.754
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.0 +/- 22.6bp
Average Position of motif in Background10.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf423/MA0116.1/Jaspar

Match Rank:1
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CCCTAAGRSTGCCWTT
GGCACCCAGGGGTGC----
 A C G T A C G T A C G T A G T C A G T C A G T C C G A T G T C A C G T A C A T G C T A G A T C G A C G T A T C G A G T C A G T C C G T A A G C T C G A T
T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C A C G T A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CCCTAAGRSTGCCWTT
ATGCCCTGAGGC-------
 A C G T A C G T A C G T A G T C A G T C A G T C C G A T G T C A C G T A C A T G C T A G A T C G A C G T A T C G A G T C A G T C C G T A A G C T C G A T
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:3
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---CCCTAAGRSTGCCWTT
WTGSCCTSAGGS-------
 A C G T A C G T A C G T A G T C A G T C A G T C C G A T G T C A C G T A C A T G C T A G A T C G A C G T A T C G A G T C A G T C C G T A A G C T C G A T
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.48
Offset:1
Orientation:forward strand
Alignment:CCCTAAGRSTGCCWTT----------
-CCTCATGGTGYCYTWYTCCCTTGTG
 A G T C A G T C A G T C C G A T G T C A C G T A C A T G C T A G A T C G A C G T A T C G A G T C A G T C C G T A A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T A G C G A T C A G C T T G A C G C T A A G C T C A T G A C T G A C G T T C A G A G T C G A T C G A C T A G C T G C T A A G T C A G C T A G T C G A T C A T G C A G C T G A C T C A T G A C G T A T C G

SOX21/MA0866.1/Jaspar

Match Rank:5
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:CCCTAAGRSTGCCWTT---
----AACACTACCATTGTT
 A G T C A G T C A G T C C G A T G T C A C G T A C A T G C T A G A T C G A C G T A T C G A G T C A G T C C G T A A G C T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A G T C A G A T C G C T A G T A C A G C T C T G A G T A C G T A C G T C A A G C T A G C T T A C G A G C T G A C T

PB0128.1_Gcm1_2/Jaspar

Match Rank:6
Score:0.48
Offset:-6
Orientation:reverse strand
Alignment:------CCCTAAGRSTGCCWTT
NTCNTCCCCTATNNGNN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C C G A T G T C A C G T A C A T G C T A G A T C G A C G T A T C G A G T C A G T C C G T A A G C T C G A T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A A C G T A C G T A C G T A C G T A C G T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:7
Score:0.47
Offset:2
Orientation:reverse strand
Alignment:CCCTAAGRSTGCCWTT
--NTAATKGTTT----
 A G T C A G T C A G T C C G A T G T C A C G T A C A T G C T A G A T C G A C G T A T C G A G T C A G T C C G T A A G C T C G A T
A C G T A C G T A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T A C G T A C G T A C G T A C G T

SOX4/MA0867.1/Jaspar

Match Rank:8
Score:0.46
Offset:4
Orientation:reverse strand
Alignment:CCCTAAGRSTGCCWTT----
----AACACTGCAATTGTTC
 A G T C A G T C A G T C C G A T G T C A C G T A C A T G C T A G A T C G A C G T A T C G A G T C A G T C C G T A A G C T C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C T G A A G T C G T C A G T A C A G C T A C T G G T A C G T C A G T C A G A C T A G C T A C T G A G C T A C G T G A T C

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:9
Score:0.46
Offset:-6
Orientation:forward strand
Alignment:------CCCTAAGRSTGCCWTT
AAGCCCCCCAAAAAT-------
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C C G A T G T C A C G T A C A T G C T A G A T C G A C G T A T C G A G T C A G T C C G T A A G C T C G A T
C T G A C T G A T C A G T A G C T A G C G T A C G T A C A G T C G A T C G C T A G C T A G C T A C G T A G T C A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:10
Score:0.46
Offset:-2
Orientation:forward strand
Alignment:--CCCTAAGRSTGCCWTT
TGCCCCCGGGCA------
 A C G T A C G T A G T C A G T C A G T C C G A T G T C A C G T A C A T G C T A G A T C G A C G T A T C G A G T C A G T C C G T A A G C T C G A T
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T A C G T A C G T A C G T