Information for 6-GAGCMRAGCAMAY (Motif 9)

A C T G C G T A C T A G A G T C G T C A C T A G C G T A A C T G A T G C G T C A G T C A C G T A A G C T
Reverse Opposite:
C T G A A C G T C A G T A C G T A T C G A G T C A C G T A G T C A C G T A C T G A G T C A C G T A G T C
p-value:1e-12
log p-value:-2.790e+01
Information Content per bp:1.870
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.9 +/- 29.1bp
Average Position of motif in Background65.1 +/- 19.3bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GAGCMRAGCAMAY------
---CGAAGCACACAAAATA
 A C T G C G T A C T A G A G T C G T C A C T A G C G T A A C T G A T G C G T C A G T C A C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GAGCMRAGCAMAY---
NNNVCTGWGYAAACASN
 A C G T A C T G C G T A C T A G A G T C G T C A C T A G C G T A A C T G A T G C G T C A G T C A C G T A A G C T A C G T A C G T A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

PB0121.1_Foxj3_2/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GAGCMRAGCAMAY--
AACACCAAAACAAAGGA
 A C G T A C G T A C T G C G T A C T A G A G T C G T C A C T A G C G T A A C T G A T G C G T C A G T C A C G T A A G C T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GAGCMRAGCAMAY
NNNAGATCAAAGGANNN
 A C G T A C G T A C G T A C G T A C T G C G T A C T A G A G T C G T C A C T A G C G T A A C T G A T G C G T C A G T C A C G T A A G C T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GAGCMRAGCAMAY
CAGCC--------
 A C T G C G T A C T A G A G T C G T C A C T A G C G T A A C T G A T G C G T C A G T C A C G T A A G C T
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL001.1_MTE/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GAGCMRAGCAMAY--
TTTCGAGCGGAACGGTCGC
 A C G T A C G T A C G T A C G T A C T G C G T A C T A G A G T C G T C A C T A G C G T A A C T G A T G C G T C A G T C A C G T A A G C T A C G T A C G T
A C G T G A C T A G C T A G T C C T A G C G T A C T A G A G T C A T C G T A C G C G T A C T A G A G T C A C T G A T C G C G A T G A T C T A C G A G C T

PB0199.1_Zfp161_2/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GAGCMRAGCAMAY
GCCGCGCAGTGCGT--
 A C G T A C G T A C G T A C T G C G T A C T A G A G T C G T C A C T A G C G T A A C T G A T G C G T C A G T C A C G T A A G C T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GAGCMRAGCAMAY-
----WAAGTAAAYA
 A C T G C G T A C T A G A G T C G T C A C T A G C G T A A C T G A T G C G T C A G T C A C G T A A G C T A C G T
A C G T A C G T A C G T A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GAGCMRAGCAMAY
CGGAGC---------
 A C G T A C G T A C T G C G T A C T A G A G T C G T C A C T A G C G T A A C T G A T G C G T C A G T C A C G T A A G C T
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GAGCMRAGCAMAY
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T A C T G C G T A C T A G A G T C G T C A C T A G C G T A A C T G A T G C G T C A G T C A C G T A A G C T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A