p-value: | 1e-6 |
log p-value: | -1.416e+01 |
Information Content per bp: | 1.647 |
Number of Target Sequences with motif | 28.0 |
Percentage of Target Sequences with motif | 3.67% |
Number of Background Sequences with motif | 599.7 |
Percentage of Background Sequences with motif | 1.25% |
Average Position of motif in Targets | 52.0 +/- 28.2bp |
Average Position of motif in Background | 49.1 +/- 27.7bp |
Strand Bias (log2 ratio + to - strand density) | -0.1 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 1 |
Score: | 0.59 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | YAGCAAAGHCTGG--- ------GGTCTGGCAT |
|
|
|
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 2 |
Score: | 0.59 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | YAGCAAAGHCTGG -----TWGTCTGV |
|
|
|
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 3 |
Score: | 0.58 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | YAGCAAAGHCTGG -----CTGTCTGG |
|
|
|
PB0060.1_Smad3_1/Jaspar
Match Rank: | 4 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | YAGCAAAGHCTGG----- -NNTNNTGTCTGGNNTNG |
|
|
|
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer
Match Rank: | 5 |
Score: | 0.57 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | YAGCAAAGHCTGG-- VAGRACAKNCTGTBC |
|
|
|
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 6 |
Score: | 0.56 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | YAGCAAAGHCTGG--- ------WDNCTGGGCA |
|
|
|
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
Match Rank: | 7 |
Score: | 0.55 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -YAGCAAAGHCTGG-- GCAGCCAAGCGTGACN |
|
|
|
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 8 |
Score: | 0.55 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | YAGCAAAGHCTGG ---VBSYGTCTGG |
|
|
|
NFIC/MA0161.1/Jaspar
Match Rank: | 9 |
Score: | 0.54 |
Offset: | 9 |
Orientation: | forward strand |
Alignment: | YAGCAAAGHCTGG-- ---------TTGGCA |
|
|
|
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 10 |
Score: | 0.54 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -YAGCAAAGHCTGG- SCAGYCADGCATGAC |
|
|
|